Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1439 |
Symbol | |
ID | 8252539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1710691 |
End bp | 1711713 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644935092 |
Product | glycoside hydrolase family 25 |
Protein accession | YP_003091715 |
Protein GI | 255531343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGA AGCATCCGGA TGTCGACCAG GAACATTGGC TTTTTTATTT TGGGAGCAGA CCTGTATGGC GTATTCAGAG TTTATTGTAT TTTTGCAGGA TCATGCCTCC AGCACCTAGA AAAACACCTG CTTCCAGAAA ATCTACTTTC CGTCAAACTT ATGAATCAGA TGCATCAGGC CGTCCTCGAA GAAAAACAAC TCCAAGAAAG AAAGTTGTAA AAAAAAGAAA GCCATGGCCG GTAGGTCTTA AGTTTTTGAT AGCTGCACTA TTGCTGATTT TGCTTTCCCC ATTCTATTAC GGATATATTA TTAAAGGTTT TTCTTCCACC TGGCGATGGA TAAAAGACCT GGGCGAAGAT CCCAGTTACC GTACTTACAG CAGCTTTGAC ATCAGGATAC CCAAAGGTTT TGGTATTCAT GGCATTGATG TTTCTTACTA TCAGGGCAAA ATAGATTGGA AACAGGTTAA GGCCATGAAG GAAGATGATG TTAAGATTGA TTTTGCATTT ATAAAGGCCA CTGAAGGTTT GTTTAAAGTA GATCCTTATT TTCAGCGGAA TTGGCGTGAA GCACCAAAGG CCGGGGTTGT TTGCGGCGCT TACCATTATT TCAGGCCGCA AAAACCAGGT GAATGGCAAG CTAAGTTCTT TTTGCAGACC GTTAATTTTG AAGCTGGAGA TTTGCCGCCT GTTGTTGATA TAGAAGAACT GGATGGTGTA CCGGCCTCAA AAATGAGGGT TCAGTTAGCC GGATTCTTAA AACATATTGA AAAGAAAACT GGTGTTAAAC CCATCATTTA TACAGGCTTG TCTTTTTATA AGGACTATCT TCGGGGATAT TTTGATGCAT ATCCACTATG GATCGCACAC TATCATCAGC CAAAATTAAA AGTTAGTGAG GCCACAAACT GGCACTTCTG GCAGCATTCT GATAAAGCTA AAATCTCAGG GATCAACCAT GTAGTTGATT TTAATGCATT TAATGGGGAC AGCCTGGCAT TTGACCGCCT GCTGATCAAA TAA
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Protein sequence | MLKKHPDVDQ EHWLFYFGSR PVWRIQSLLY FCRIMPPAPR KTPASRKSTF RQTYESDASG RPRRKTTPRK KVVKKRKPWP VGLKFLIAAL LLILLSPFYY GYIIKGFSST WRWIKDLGED PSYRTYSSFD IRIPKGFGIH GIDVSYYQGK IDWKQVKAMK EDDVKIDFAF IKATEGLFKV DPYFQRNWRE APKAGVVCGA YHYFRPQKPG EWQAKFFLQT VNFEAGDLPP VVDIEELDGV PASKMRVQLA GFLKHIEKKT GVKPIIYTGL SFYKDYLRGY FDAYPLWIAH YHQPKLKVSE ATNWHFWQHS DKAKISGINH VVDFNAFNGD SLAFDRLLIK
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