Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1437 |
Symbol | |
ID | 8252537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1706834 |
End bp | 1709143 |
Gene Length | 2310 bp |
Protein Length | 769 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935090 |
Product | UvrD/REP helicase |
Protein accession | YP_003091713 |
Protein GI | 255531341 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.618729 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATTATT TAGCAGGTTT AAACCCCCAA CAACGCGCAG CAGTAGAAAA TACACAAGGC CCGGCAATGA TTGTTGCAGG TGCAGGTTCT GGAAAAACAA GGGTGATTAC CTACAGGGTT GCCCATTTGA TTGAAAAAGG GGTAGATGCC TTTAATATCC TGGTACTGAC CTTTACCAAT AAGGCCTCCA AGGACATGCG TGAGCGGATC ATGAAAGTGA TTGGCCCTGA GGCCAAAAAT ATCTGGATGG GTACCTTTCA CTCTGTATTT GCTAAAATAT TAAGGGTTGA GGCCGAGAAA ATAGGCTATC CATCTAATTT TACAATTTAT GACACTGACG ACAGCAAAAG CCTGATCAGG ACCATATTGC GGGAAATGCA GCTGGACGAT AAACTGTACA ATGCAAATTT TGTATACAAC AGAATCTCTT CTGCTAAAAA CAACCTGGTT TCGTATACAG AGTACATGCA AAATCCTGAA ATCCAGGCCG AGGATGTAAG CAATAAACGG CCTTTGATCG GGGTGATTTA TGAAACTTAT ACCAAGCGCT GCTTTAAAGC TGGTGCAATG GATTTTGATG ATCTGTTGTT CAAAACGAAT GTTTTGCTGA AAACCCATCC CGATGTACTG AACAAATACC AGCAGAAATT TAAATACCTG ATGGTAGATG AGTACCAGGA TACCAACTTT TCGCAGTATA CAATTGTTAA AAAGCTGGCC GCCGCTTATC AGAATATATG TGTGGTGGGT GATGATGCCC AAAGTATTTA TGCCTTCAGG GGGGCGAACA TCCAGAACAT CCTGAACTTT GAACGCGATT ATCCCGATTT AAAGGTCTAT AAACTGGAGC AGAATTACCG TTCCACCCAA AATATTGTTG AGGTGGCCAA CAGTATCATC GCAAACAATA AAAATCAGCT GGAAAAGAAC GTATTTTCTG ATAATGAAGC GGGCGACAGG ATCAAGGTAC AACGTGCTTT TACGGATAAT GAGGAAGGTA AAATGGTAGC AGAGGCCATT GTACAGGAAC GTTCATCCAA GGGTTACGAT TACCACGATT TCGCTATCCT GTACAGGACA AATGCCCAGT CGCGCGCCAT GGAGGAGGCT TTAAGAAAAT TAAATGTACC TTATAAGATA TACGGCGGTC TCTCCTTCTA TCAGCGGAAA GAGGTAAAGG ATTTAATTGC CTATTTCAGG TTAACTTTTA ATCCTGCTGA TGAAGAGGCC ATTAAAAGGG TAATCAATTA CCCGCGCAGG GGTTTGGGCG ACACAACGGT AGAGAAAATC ATGGTGGCTG CCGATCAGCA CAACATTACG ATGTGGCAGG TGATCTGCAA CCCGCAGCAA TACATACCAG GCAGAATTGC CAATCAACTG AATGATTTTG CCGTAATGGT CCAGAGTTTT GCTGTTGAGG CAAAGAAACT GGATGCTTAC GAAACAGCTT TATACATTGC CCAGCATTCC GGAATTTTAA AGGAACTGCA TGCCGACCAG TCGGAAGAGG GGCGTGGCCG GCATGAGAAC ATACAGGAGC TGTTAAATGG TATTAAGGAA TTTGGTGAGC GTGAAGACAT TGAAGACCGT AGTCTGGCTA TTTTTATGCA GGATATTGCA TTACTGACCA ACGATGATAA AGCTGACGAC AAGAACAAGG ACACGGTTTC ATTGATGACC ATCCACTCGT CCAAAGGTTT GGAGTTCAAG AACGTATTTG TAGTTGGGCT GGAAGAAAAC CTGTTTCCTT CGCAGATGTC GCTAAATTCC CGCAGCGACC TTGAAGAGGA GCGCAGACTG TTCTATGTAG CCGTAACCCG TGCAGAAAAA AAGCTGACCC TCACCTACTC TACCTCAAGG TATCGCTGGG GAACGCTGAC CAATTGTGAA CCCAGCAGGT TTATAGATGA AATTAATGCC CGTTATCTGG AAATTGAAGT GGTAAAACCT GCAAAAAGCA GCCTGACCGA AAACAGTTTC AGCGATGAAA GACGGAGCTG GACACAGCAA CGGGATACTT TTAGCAAACC AAAACCAGCC TCAGGAGGTA CAGGAACAGT AAGTACGCAG GCACCAAGGC CAAAAACTAC CGCCATGTTA CCTAAAGCAC ACGTGCCCAC ACCGGGTTTT ACCCCCGATG CTGCAAGTGC TTTTCAGAAT GGCATGGATG TAGAGCATGA AAAATTTGGT TTCGGAAAAA TTATCAGTCT GGAAGGGACC TTACCTGATG TAAAAGCAAC CGTGTTTTTC CAGGGCCTTG GCAACAAACA ATTGTTACTA AAATTTGCTA AGTTGCGAAT TGTGAAATAA
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Protein sequence | MDYLAGLNPQ QRAAVENTQG PAMIVAGAGS GKTRVITYRV AHLIEKGVDA FNILVLTFTN KASKDMRERI MKVIGPEAKN IWMGTFHSVF AKILRVEAEK IGYPSNFTIY DTDDSKSLIR TILREMQLDD KLYNANFVYN RISSAKNNLV SYTEYMQNPE IQAEDVSNKR PLIGVIYETY TKRCFKAGAM DFDDLLFKTN VLLKTHPDVL NKYQQKFKYL MVDEYQDTNF SQYTIVKKLA AAYQNICVVG DDAQSIYAFR GANIQNILNF ERDYPDLKVY KLEQNYRSTQ NIVEVANSII ANNKNQLEKN VFSDNEAGDR IKVQRAFTDN EEGKMVAEAI VQERSSKGYD YHDFAILYRT NAQSRAMEEA LRKLNVPYKI YGGLSFYQRK EVKDLIAYFR LTFNPADEEA IKRVINYPRR GLGDTTVEKI MVAADQHNIT MWQVICNPQQ YIPGRIANQL NDFAVMVQSF AVEAKKLDAY ETALYIAQHS GILKELHADQ SEEGRGRHEN IQELLNGIKE FGEREDIEDR SLAIFMQDIA LLTNDDKADD KNKDTVSLMT IHSSKGLEFK NVFVVGLEEN LFPSQMSLNS RSDLEEERRL FYVAVTRAEK KLTLTYSTSR YRWGTLTNCE PSRFIDEINA RYLEIEVVKP AKSSLTENSF SDERRSWTQQ RDTFSKPKPA SGGTGTVSTQ APRPKTTAML PKAHVPTPGF TPDAASAFQN GMDVEHEKFG FGKIISLEGT LPDVKATVFF QGLGNKQLLL KFAKLRIVK
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