Gene Phep_1431 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1431 
Symbol 
ID8252531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1700080 
End bp1701210 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content40% 
IMG OID644935084 
Productglycosyl transferase family 2 
Protein accessionYP_003091707 
Protein GI255531335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.679301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAATTAA CCTTATTAGT GAGCCTGGAG AATTGCCTGC TCGGCATATT GATTTTTTGT 
TTTCTGATAC AGCTATATTT TAGCTTGTTT GTTCACCTTA AACTGGCGCT CGTAAAGGTG
GATGAAATAC CGGATAGGGC TGCAAAACCT TTAAGTGTAG TGATCTGTGC GCGCAATGAG
ACCGAAAACC TGAAACAATA TCTTCCTGTG GTGCTGCAAC AGAATTATGC CAATTACGAG
GTGGTTGTGG TAAATGATCG TTCCTGGGAT GGTACAAAAG ACCTGCTTGA AGAATTTTCA
AAACAATACA AACATCTTAA AATCGTTACG GTAAATGAAG GAAGTAAGTT TATTGCCGGT
AAAAAATTTG CGGTAACCAT GGGTATAAAG GCTACTTCAA ACGAATGGCT GGTATTTACT
GATGCCGATT GTATGCCGGC TTCTCCCAAC TGGTTACTGG GGATGCAGCA GCCTGATGAC
GACCAGACCG AGATTGTTTT GGGCTATTCA CCTTACCTGA AGAAAAAAGG GCTTTTAAAT
GCCCTGATTA GGTTTGAAAC CTTTTTTACA GCGGTCAATT ACCTGTCTTT TGCCCTGAAA
GGAATGCCTT ATATGGGGGT AGGCCGGAAC ATGGCCTATA AAAAATCACT TTTCTTTAAC
AATAAAGGTT TTGCAGCACA TATGCACATT CCTTCCGGAG ATGACGACCT TTTTGTAAAT
GCACATGCAC ACCACAACAA TACTGCAATA AGGATCAATA AAGATGCACA GGTATGGAGC
GTGCCCAATA CCAGTTTCGG GGCTTATTTA CGGCAAAAAA AACGTCATTT TGGTGCTGGT
AAATTGTATA AAGCCAAACA CAAGTTTATT TTATCGGCCC AGATTATGGT ACAATTTCTT
TTTTATGTGG TATTTGCGCT GTTGCTGTTT TTCAAAACAA CATTTTATCC TGCGCTGGTG
ATATTGGCCC TTAGCATCAT TGTCAGGTGT TTTATCTATC CCAGGCTTTT AAAGCGGCTC
AGTTATGCTG ATTTGAGCTG GTGGTTTCCT GTGCTGGATT TACTATTATT CATTTTTTTA
GTCTTTAATG GCTTTGTATC TATATTTGTT AAAAAAATAC AGTGGAAATA A
 
Protein sequence
MELTLLVSLE NCLLGILIFC FLIQLYFSLF VHLKLALVKV DEIPDRAAKP LSVVICARNE 
TENLKQYLPV VLQQNYANYE VVVVNDRSWD GTKDLLEEFS KQYKHLKIVT VNEGSKFIAG
KKFAVTMGIK ATSNEWLVFT DADCMPASPN WLLGMQQPDD DQTEIVLGYS PYLKKKGLLN
ALIRFETFFT AVNYLSFALK GMPYMGVGRN MAYKKSLFFN NKGFAAHMHI PSGDDDLFVN
AHAHHNNTAI RINKDAQVWS VPNTSFGAYL RQKKRHFGAG KLYKAKHKFI LSAQIMVQFL
FYVVFALLLF FKTTFYPALV ILALSIIVRC FIYPRLLKRL SYADLSWWFP VLDLLLFIFL
VFNGFVSIFV KKIQWK