| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1430 |
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| Symbol | |
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| ID | 8252530 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1698762 |
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| End bp | 1699892 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935083 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_003091706 |
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| Protein GI | 255531334 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143529 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.876583 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATTCA ATTTAGCGGC AAAAGATATA CATTCGAAAG CGAGGGCAGG CACAATCACA
ACAGACCATG GCGAAATACA GACGCCCATT TTCATGCCTG TTGGCACTGC AGGAACGGTT
AAATCGATTA ACCAGCAGCA ACTTAAAAAT GATATTGATG CTAAAATCAT CTTAGGAAAT
ACGTATCATT TATATTTAAG ACCTGGTCTC GATATTCTGG AACGCGCAGG CGGTCTACAT
CAGTTTATTG GCTGGGACCG TCCGATCCTG ACGGATAGCG GCGGCTATCA GGTGTATTCC
TTAAGTAAGG TAAGGAAGAT AAAGGAAGAG GGCGTGACCT TCCGCTCTCA TATAGATGGC
TCCAAACACC TTTTTACACC AGAATACGCA ATGGACATTC AGCGTACCAT CGGGGCCGAT
ATTATTATGG CCTTCGATGA ATGCACCCCC TATCCATGTG ATTATAAATA CGCAGCAAAC
TCCATCAACA TGACCCACAG GTGGCTAAAA CGCTGTTGTA CACGCTTTGA TACCACAACA
CCCAAATACG GTTTTGACCA AACCCTGTTT CCTATCGTAC AGGGATCTGT ATACAAAGAC
CTGCGCGTAA AATCAGCAGA ATTTATTGCG GCTATGGGCC GGGAAGGTAA CGCCATTGGT
GGTCTTTCTG TAGGTGAACC TGCAGAAGAA ATGTATGCCA TGACCGAAGT GGTTTGTGAT
ATACTTCCTT ACGAAAAACC ACGTTATTTA ATGGGTGTGG GCACCCCGAT CAACATTTTA
GAGAACATTG CCCTCGGTGT AGATATGTTT GATTGTGTGA TGCCAACCAG AAATGCCAGA
AATGGCATGC TTTTCACTAA AAATGGGGTC ATCAATATCA GCAATAAAAA ATGGGCCGAT
GATTTTTCTC CTATTGAGGC AGAAAGTGAT CTGGTTGCAG ACCAGGTGTA CTCTAAAGCC
TATTTAAGAC ATTTAATGCA CTCCAAAGAG ATGCTGGGTG CACAAATTGC AACTTTACAT
AACCTCCACT TTTATTTATG GCTGGTTAAA ACTGCCCGTG AAAAAATTAT GAGTGGAGAA
TTTTACGCCT GGAAAAACAA AATGGTTACT ATATTAGGTA ATAAATTGTA A
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| Protein sequence | MKFNLAAKDI HSKARAGTIT TDHGEIQTPI FMPVGTAGTV KSINQQQLKN DIDAKIILGN
TYHLYLRPGL DILERAGGLH QFIGWDRPIL TDSGGYQVYS LSKVRKIKEE GVTFRSHIDG
SKHLFTPEYA MDIQRTIGAD IIMAFDECTP YPCDYKYAAN SINMTHRWLK RCCTRFDTTT
PKYGFDQTLF PIVQGSVYKD LRVKSAEFIA AMGREGNAIG GLSVGEPAEE MYAMTEVVCD
ILPYEKPRYL MGVGTPINIL ENIALGVDMF DCVMPTRNAR NGMLFTKNGV INISNKKWAD
DFSPIEAESD LVADQVYSKA YLRHLMHSKE MLGAQIATLH NLHFYLWLVK TAREKIMSGE
FYAWKNKMVT ILGNKL
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