Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1429 |
Symbol | |
ID | 8252529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1697658 |
End bp | 1698761 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644935082 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_003091705 |
Protein GI | 255531333 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.398459 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.880258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTTA TCAAGGACAG GGTCAAAATT CTCGACTGGT ATATCATCAG CAAATATCTG GGCACGTTTT TATATACGCT TACCTTATTT GTAGTGATCA TCATTATTTT TGACCTGTCG GAGAAACTGG ATGATTTTTT AAGTGCCAAC CTTACCTTCT GGCAGGTCAT ATCACTTTAT TACGCCGGCT CTATCCCTTA TTATGTAAAT ATGCTGTCGC CGCTGATCAA TTTTATAGCG GTTATATTTT TTACTGCAAA AATGGCCGAC CAAACTGAAA TTGTGCCTAT TTTAAGTGGG GGAGTAAGCT TTAACCGTTT TCTTCTTCCC TATTTTGTAT CTGCATTTGT CATTTTTGCG GTTAACCTGG CTTCCAACTT ATACATCCTG CCCTATACCA ATCAGCTCAA AAACACTTTC GAGAATACCT ACGTAAAGAA AAATGATCCA TCCAGCAAAA GCAATATCCA TATGAAGCTG GACGACAACA CCTATATCTT TATGGATAAT TTCGACAATA AGAGCAAAAC AGGTACAAAA TTCTCATTAG ACAACTTTAA AGGGGATGTG CTGACCAAGA AGCTTATTGC AGACGAAATC AAATGGGACT CCTTAAAACG ATCATGGAAG CTAACAAACT ATTCTATAAG ATATGTGAAC GGCTTAAAGG AAACTTTTGT AAGCGGTACT TCCCTTACAA AAGACACGGT ACTTGACATG CGGCCGGACG ACTTCTCTGC TTACGACAAT GTCTTTGAAA ATTTAAGCAA TAAAGAACTC TCTGAAAAGA TCAGAAAAGA AAGAATCAGG GGCTCCGGTA TCTGGAACGA CCTCTTATTT GAGCAATACA AACGCTATTT ACACCCTTTG TCGGCTTTTG TTTTAACCCT TATAGGTGTC GCATTATCCT CCAGAAAGGT GCGTGGAGGG GTTGGACTGC CCTTAGGTAT CGGAATTTTA TTAAGTTTTG CTTACATTGT ATTTAACCAA TTCGCAAAAA TGTTTTCTCT TAAAGGCGGC ATGCCTCCGT TACTGGCTGT AATTGCACCC ACTTTATTTT TTGGTTTACT GGGCTTTTAT CTGCTCAGAA AGGCCCCCAA ATAA
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Protein sequence | MNFIKDRVKI LDWYIISKYL GTFLYTLTLF VVIIIIFDLS EKLDDFLSAN LTFWQVISLY YAGSIPYYVN MLSPLINFIA VIFFTAKMAD QTEIVPILSG GVSFNRFLLP YFVSAFVIFA VNLASNLYIL PYTNQLKNTF ENTYVKKNDP SSKSNIHMKL DDNTYIFMDN FDNKSKTGTK FSLDNFKGDV LTKKLIADEI KWDSLKRSWK LTNYSIRYVN GLKETFVSGT SLTKDTVLDM RPDDFSAYDN VFENLSNKEL SEKIRKERIR GSGIWNDLLF EQYKRYLHPL SAFVLTLIGV ALSSRKVRGG VGLPLGIGIL LSFAYIVFNQ FAKMFSLKGG MPPLLAVIAP TLFFGLLGFY LLRKAPK
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