| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1425 |
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| Symbol | |
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| ID | 8252525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1692101 |
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| End bp | 1693267 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935078 |
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| Product | Methionine gamma-lyase |
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| Protein accession | YP_003091701 |
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| Protein GI | 255531329 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAG ACAATTTCGA AACGTTGGCC ATACGTTTAC AAGCCGAGAG GACCCAGTTT
AAAGAACATT CGGTACCACT GTACCTGACA TCCAGTTACA AATTTGACGA TGCTGAGGAT
ATGCGTGCGC TTTTTGCGAA CGAGAAGGAA GGAAATGTTT ACAGCCGCTA CGCAAACCCG
AACACTGATG AACTGATCAA TAAAATGTCG GTACTGGAAG GTGCAGAAGC AGGCTGGGCA
ACAGCTAGTG GAATGGCCGC CATATTTACT ACTTTTTTAA CTTTTTTAGC ATCGGGCGAT
CATGTGTTGT CCAGTCGTTC TGTCTTTGGT TCTACGCATC AGCTGCTGAA TAATATTTTT
CCTAAATGGG GCATCAGTTA TACCTATGCC GATCTGGATA AACCGGAAGA ATGGGAAAAA
GGAATACAGT CAAATACAAA GATGATATTT GTTGAAACGC CGTCCAACCC TGGTATTGAT
ATCATAGATC TGGAATGGCT GGCTAAACTA GCGAAGAAAA ACAACATAAT GCTGGTGGTA
GACAATTGTT TTGCTACCCC ATATTTACAG CAGCCGATAA AACTCGGGGC TGATATTTCC
ATTCATTCTG CTACAAAATT TATTGACGGG CAGGGACGTA CCCTTGGAGG TATTATCCTC
GGTTCGGCAA AACACATCAA AGATATTGAA GGATTTGCAA GACATAGCGG ACCTGCCATG
TCGCCATTTA ATGCCTGGTT GCTTTCTAAA AGTTTGGAAA CACTGGCGGT GCGTATGGAC
AGGCATTGTG AGAACGCTTT GAAGGTGGCT GAATTTTTAG AGGCACATGC CAGCATCAAA
AAAGTAATGT ATCCGTTTTT ACCGTCGCAC CCTCAGTATG AAATCGCTAA AAAGCAGATG
AAACAGGGTG GTGGTATTGT TACTTTGGTT ATTGAAGGGG GTGCTGAAGC GGCCAGCAGG
TTTATGAATA AATTAAAAAT GTTCTCTATC TCGGCCAATC TTGGCGATAC CCGTTCTATC
GCTACGCACC CGGCTACCAG TACGCATTCC AAATTAACGG AAGCGGAACG TTTACAGGTA
GGTATTGAGC AGGGGACCAT TCGTCTGTCT ATCGGCTTAG AACACATCAA TGATATCATC
GGGGATATTG AACAGGCCTT GGTATAA
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| Protein sequence | MQEDNFETLA IRLQAERTQF KEHSVPLYLT SSYKFDDAED MRALFANEKE GNVYSRYANP
NTDELINKMS VLEGAEAGWA TASGMAAIFT TFLTFLASGD HVLSSRSVFG STHQLLNNIF
PKWGISYTYA DLDKPEEWEK GIQSNTKMIF VETPSNPGID IIDLEWLAKL AKKNNIMLVV
DNCFATPYLQ QPIKLGADIS IHSATKFIDG QGRTLGGIIL GSAKHIKDIE GFARHSGPAM
SPFNAWLLSK SLETLAVRMD RHCENALKVA EFLEAHASIK KVMYPFLPSH PQYEIAKKQM
KQGGGIVTLV IEGGAEAASR FMNKLKMFSI SANLGDTRSI ATHPATSTHS KLTEAERLQV
GIEQGTIRLS IGLEHINDII GDIEQALV
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