Gene Phep_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1416 
Symbol 
ID8252516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1682946 
End bp1683452 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content38% 
IMG OID644935069 
Productprotein of unknown function DUF1452 
Protein accessionYP_003091692 
Protein GI255531320 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.534453 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0459929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAA AAGAAGGAAA AAATAACAGT TTATTTGAAC GTTTTGCTAA TGCTGCAACT 
ACCTTTACGG GCAGTTCAGC CGCTTTTATT ACCGCTACCG CTATTGTGGT GATATGGGCT
TTAAGCGGGC CCGTATTCAA TTATTCAGAA ACCTGGCAGC TTGTGATCAA TACCGGAACA
ACCATTATTA CCTTTCTGAT GGTGTTTTTA ATTCAAAAAG CACAGAATAA AGATGGAAAA
GCCATCCAGT TAAAACTGAA TGAACTGATT GCTGCTCATG AACGTGCAAG CAACAGGATG
GTCGATATTG AGGACCTGAC TGAAAGGGAG CTTGACCAGT TGCATAAATT TTATGTAACG
CTGGCAGACC TTGCTAAAAA GGAAAATGAC ATTCATTGTT CTCATTCCAT AGATGCTGCC
GGGGAAATCC ACGAAATTAA AAGAAAAGTA AAAACTATAT CAAAAAAAAT TCATGGAAGC
ACTGCTCGTA AACAAGATCA AAAATAA
 
Protein sequence
MNKKEGKNNS LFERFANAAT TFTGSSAAFI TATAIVVIWA LSGPVFNYSE TWQLVINTGT 
TIITFLMVFL IQKAQNKDGK AIQLKLNELI AAHERASNRM VDIEDLTERE LDQLHKFYVT
LADLAKKEND IHCSHSIDAA GEIHEIKRKV KTISKKIHGS TARKQDQK