| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1414 |
|---|
| Symbol | |
|---|
| ID | 8252514 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1680745 |
|---|
| End bp | 1681590 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644935067 |
|---|
| Product | acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| Protein accession | YP_003091690 |
|---|
| Protein GI | 255531318 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0777] Acetyl-CoA carboxylase beta subunit |
|---|
| TIGRFAM ID | [TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.111409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTGGT TTAAGAGAGA AAAAAAAGGT ATCAGTACAT CAACAGAAGA AAAGAAAGAG
GCACCAGACG GTTTATGGAA TAAGTGCCCG AATTGTAAAA AGGCTTTACA TAGTGCTGAC
CTGCTAGAGA ATAAATATGT TTGCCAATAC TGCAATTATC ATTTGCGTGT GGGTTCCAAA
GAATATTTCC AGGTATTGTT CGACAACAAT CAGTTCACAG AACTATTTCC GAACCTGACC
TCGGGCGACC CCCTGAACTT TACAGACAGC AAACCCTATA CAGAAAGGCT AATAGAAAGC
ATGGCTAAAA CCGGCTTAAA GGATGCTATA AGAGCTGCTC ATGGTAAAAT AGAGGGTGAA
GACCTGGTAG TGGCCTGTAT GGACTTTAAC TTCATTGGCG GATCGATGGG CTCGGTAGTT
GGTGAAAAGA TTGCCCGTTC TATTGATTAT AGCATTAAAC ACAAAATCCC TTTCCTGATG
ATTTCAAAAT CAGGTGGTGC AAGAATGATG GAAGCTGCAT TTTCATTAAT GCAAATGGCT
AAAACATCGG CCAAACTGGC TTTGTTAAGT CAGGCTAAAA TCCCGTATAT TTCTTTATTG
ACCGACCCTA CCACTGGTGG TGTAACTGCT TCCTATGCTA TGCTGGGCGA CATCAATATC
GCTGAACCAG GTTCATTAAT AGGTTTTGCG GGTCCCAGGG TGATTAAAGA AACTATCAAA
AAAGATTTAC CTAAAGGCTT CCAGACTGCC GAATTTGTTT TGGAACACGG CTTTTTAGAT
TTCATAGTAG ACCGCAGGGC AATGAAAGCG AAACTGGCGG CTTTCCTTAA AATGATGAAG
AATTAA
|
|---|
| Protein sequence | MAWFKREKKG ISTSTEEKKE APDGLWNKCP NCKKALHSAD LLENKYVCQY CNYHLRVGSK
EYFQVLFDNN QFTELFPNLT SGDPLNFTDS KPYTERLIES MAKTGLKDAI RAAHGKIEGE
DLVVACMDFN FIGGSMGSVV GEKIARSIDY SIKHKIPFLM ISKSGGARMM EAAFSLMQMA
KTSAKLALLS QAKIPYISLL TDPTTGGVTA SYAMLGDINI AEPGSLIGFA GPRVIKETIK
KDLPKGFQTA EFVLEHGFLD FIVDRRAMKA KLAAFLKMMK N
|
|---|
| |