| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1406 |
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| Symbol | |
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| ID | 8252506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1674426 |
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| End bp | 1675367 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644935059 |
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| Product | RNA procession exonuclease-like protein |
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| Protein accession | YP_003091682 |
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| Protein GI | 255531310 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0847473 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATATTAG ATGATTTTAT AGTGGTTACC AAAACAGGTT TGTTTTGTAA GTATGGCGAC
TTTTACCTGG ATCCAAAGGA AATAGTGAAA CATGCAGTAA TCTCTCATGC ACATGGTGAT
CATGCGATTG GCGGTAACCT CAATGTATAT TGTACCGAAG CAACGGCCCT GTTTATGAAG
CACCGGTACA AAAAGTTCGC AGGGGCTGAA TTTTATATTA AACCCTATGC TACAGCCTTT
GACCTGAACG GAGTGCGTAT CAGTTTTATT CCGGCAGGGC ATATATTGGG CTCAGCACAG
GTTTTAATGG AGTATAAGGG GGTAAAATAC CTTTATACCG GAGATTATAA GCTACAACCG
GATAAAACCT GTGAACCCAT TGAATTTGTA ACTGCCGACG TGCTGATTAC AGAAACTACT
TTTGCGGACC CTGGTACACA ACATCCGGTG GCAGAAGAGG AGATCCTGAA ATTAAATGCT
ACGCAGAACA ACATTATGCT GGGTGCTTAT TCATTAGGTA AGTGCCAGCG ACTGATTAGT
TTAATGAATG ACCATTGTAT AGAAAAAAGG ATATTGGTAC ACCACAGTAT GTTGCCTTTT
ATTAAAATAT ACGAACAGAT GGGGATAAAC CTTGGGCGGT ACGAGGCTTA CGACCGCAAG
GTGATGAAAA ACAATGTAGC CAATATGGTT TATATGGTGC CCCCAATGGT GTTTAGAAGC
TATTTTAAGG CCATTAATGT GATCAGGGTA TTTGCTACCG GCTGGAAACA CCTGCAAAAC
AATCATGAAA TCCAGTTGTA TATATCTGAT CATGCCGATT GGAACGACAT TCTTTTTACG
GTAGAAAAGG TAAAACCTAC GCAGATATGG ACCAATCATG GAAGTGGAAT TCAACTCAAA
AGTCATTTTG AAAGAAGTTT GGTCGTTAAA TTGCTTAACT GA
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| Protein sequence | MILDDFIVVT KTGLFCKYGD FYLDPKEIVK HAVISHAHGD HAIGGNLNVY CTEATALFMK
HRYKKFAGAE FYIKPYATAF DLNGVRISFI PAGHILGSAQ VLMEYKGVKY LYTGDYKLQP
DKTCEPIEFV TADVLITETT FADPGTQHPV AEEEILKLNA TQNNIMLGAY SLGKCQRLIS
LMNDHCIEKR ILVHHSMLPF IKIYEQMGIN LGRYEAYDRK VMKNNVANMV YMVPPMVFRS
YFKAINVIRV FATGWKHLQN NHEIQLYISD HADWNDILFT VEKVKPTQIW TNHGSGIQLK
SHFERSLVVK LLN
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