| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1401 |
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| Symbol | |
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| ID | 8252501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1671048 |
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| End bp | 1671998 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644935054 |
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| Product | NusB/RsmB/TIM44 |
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| Protein accession | YP_003091677 |
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| Protein GI | 255531305 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.00979954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTAAACA GAAGGCACTT AAGAATTAAA GCTCTGCAAA ATATTTTTGC TTGGCACATG
ACAGACAAAA AGGATCTGGC TTCCTCAAAG AAAGCGTTAA TGCAAAGTAT TGATAATGTA
TACGAAATGT ATATATGGAT GCTTTCGCTA TTGGTTGAGG TTACAGAATA TACAGGGATT
GACGCTACAG AGCGCGCCAA TAAACATTTG CCTACAGCAG AAGACCTGAA CCCTAATTTA
AAGCTGCTGA ACAATAAGTT TGCAGTTACA TTGAAAAAGA ATCCGGATTT TAGTGCTGCG
GTACATAAAT ATAAGATCAA CTGGATGGCC GATCCGGAAT TCGTAAAGGC TATTTTTAAT
ACTTTAAAGG TCACTCCAGA GTATGCCACC TATCTGGCCG ATGAGAACAA CGATCTGGAA
GAATCAAAAA CGATCATCAA ATTCATCTTC AGAAAGGTCA TCCTAAAAAG CCATAATATT
ATACAGGCTT TCGAGGACAG GTTCATCAAC TGGTCGGTAG ACAAGGAAGT AATGCAGGGA
ATGGTGGCCA AAACCATCAA AAATTTTACT TCTGAAGATC CTTTTAAAAA TAAACTGACG
CCGATAAGCC AGGACTGGGC AGAAGACAGC AAATTTGTAG AAGACCTGTT TGTGCACACC
TTAAAAAGTG ATAAGGAATA CCAGGGCCTG ATTGCCGAAA GAACCAAGAA CTGGGAGTCG
GAGCGTATTG CTTTAATGGA TACCATCCTG ATGAAAATGG CCATATGTGA ATTGATGAAT
TTCCCTTCCA TACCTGTTAA AGTAACTATT AACGAGTACC TTGATCTCTC AAAAGATTAC
AGTACTCCGA AAAGTAATTC ATTTATTAAC GGTATCTTGG ACAAAATTTT AGGCGATCTG
AAAAGAACAA ACAGCATACA TAAAATTGGT CGCGGACTAA TAGAAGAATA A
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| Protein sequence | MLNRRHLRIK ALQNIFAWHM TDKKDLASSK KALMQSIDNV YEMYIWMLSL LVEVTEYTGI
DATERANKHL PTAEDLNPNL KLLNNKFAVT LKKNPDFSAA VHKYKINWMA DPEFVKAIFN
TLKVTPEYAT YLADENNDLE ESKTIIKFIF RKVILKSHNI IQAFEDRFIN WSVDKEVMQG
MVAKTIKNFT SEDPFKNKLT PISQDWAEDS KFVEDLFVHT LKSDKEYQGL IAERTKNWES
ERIALMDTIL MKMAICELMN FPSIPVKVTI NEYLDLSKDY STPKSNSFIN GILDKILGDL
KRTNSIHKIG RGLIEE
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