Gene Phep_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1387 
Symbol 
ID8252487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1651171 
End bp1652247 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content43% 
IMG OID644935040 
Producthypothetical protein 
Protein accessionYP_003091663 
Protein GI255531291 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.585721 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.143708 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAATAG GCCTGATCGT AGCAATCGCC TTCTGCCGCT CTACCCGTTT ACTGGCACAG 
ACGGACAGCA TTGTTTACAC AAATGCCAGC AGCCTGTATA TGTCGGGCAA GTTGTTTAAT
ACTGCCAATC CTTATCAGCG AATTGATACA GCAAAATATC CAACTTTACC GGCACCTGTT
AAAAGATTGC TTACCCATTC GGCCGGACTG GCCATTTGCT TCAGCAGCAA CAGCACATCC
ATATCGGCAA AATGGTGTAT AAATAAGCCG CTTAGCTATA GCAACATGAC TACAATAAAT
AGCCAGGGCT TAAACCTTTA TGTGCAAAAC AAAGGCAAAT GGCAGTTTGC AGGGGTAGCC
AAACCCGATA ACAAGAAATG TGCACAAGCA GTTATTGTGG AAAATATGGC CAAAGGAGAG
AAAAAATTTA TGCTATACTT ACCTACCTAT AATGAACTAA GTAGTCTTGA GATAGGCGTG
GCGCCTGGAA GCAGCATCAA GTCTACAGCC AATGTGTTTA AAAAACGTAT CGCAGTTTAT
GGATCGAGTG TTACCCAGGG AGCATCTGCC AGTCGTTCAG GTTTGGCCTA CCCGGCCATG
CTTTCCCGTC ATTTTGGTTA CGACTTTATC AATATCGGCA TGAGCGGAAG TGCTAAAATG
GAACCTGCTG TAGTTGCTAT GGTAAATGAT GTGGAAGCTG ATGCATATTT ATTGGATTGT
ATTCCGAACG CATCTGTACA GCAAATAAAA GACCGTACTT TAAATATGGT GGTGGCGATT
CAGAAAGCAC ACCCGGGCAA ACCGATCATA TTACTGAATA GTATTAGCCG CGAACAAGGA
TTTGTTGATG TGAAAATGGG AGCCAAAGTT TTAGCCCAAA ACAAGGCTGT CGACAGCATT
GCCAACATCC TGCTTACCAG ACATACCAGA GATTTTTATT TTATTGATGT CAAAGATTTT
TTTGGTGATG ATCATGAGGC CTCAACAGAT TATGCGCACC CTAATGATCT CGGCAATTAC
AGGTTTGTAC AAAAACTGCA GCCCATAATT GCAGCTATCT TTAAAAAGTA CTTCTGA
 
Protein sequence
MLIGLIVAIA FCRSTRLLAQ TDSIVYTNAS SLYMSGKLFN TANPYQRIDT AKYPTLPAPV 
KRLLTHSAGL AICFSSNSTS ISAKWCINKP LSYSNMTTIN SQGLNLYVQN KGKWQFAGVA
KPDNKKCAQA VIVENMAKGE KKFMLYLPTY NELSSLEIGV APGSSIKSTA NVFKKRIAVY
GSSVTQGASA SRSGLAYPAM LSRHFGYDFI NIGMSGSAKM EPAVVAMVND VEADAYLLDC
IPNASVQQIK DRTLNMVVAI QKAHPGKPII LLNSISREQG FVDVKMGAKV LAQNKAVDSI
ANILLTRHTR DFYFIDVKDF FGDDHEASTD YAHPNDLGNY RFVQKLQPII AAIFKKYF