| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1383 |
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| Symbol | |
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| ID | 8252483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1643157 |
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| End bp | 1646621 |
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| Gene Length | 3465 bp |
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| Protein Length | 1154 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935036 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091659 |
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| Protein GI | 255531287 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.219265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.257074 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATTAA ACTTTAATAT TAAGGAACTG CTATGTAGTA AAATATTACC CAATAAACAA
CCAAATAACT ATTTAGGGTT ATTTCGAATA CCACCGGACA CTAAGAACCT AATCATGAGG
CTTAATATCA TCGTATTATT TTTAACATTA TCCTTTTTAC AGATAAGTGC TAAAAGCTAC
TCCCAAAATA TTAATCTGAC TGGGCAGAAC ATTCCTCTGG AAAAAGTCTT TGCCAGCATC
GAACAGCAAA GTGGCTACTT CTTTTTTTAT AACTATAAAG AGCTAAAAGA TGCCAGACCT
GTAACCGTCG GCCTGAAAAA TGTGCCGCTA AATGAGGCTT TAAAAAAAAT ACTACAGGGG
CAGCCATATA CTTATGCAAT TGCTGTGAGT AACAAATCAA TTGTGGTAAA AAAGGTATCC
CAGCCTGTAA ATGCAACATT GCCGGTTGAA TCGGTGATCA TACAGGGTAA GGTAATTGAC
GAAAAGGGCC TGACATTACC TGGCGTTAGT GTTAAGCTTA AGGGTACGGC AATAGTAGCA
ATAACAGACA AAGACGGGAA ATACAGCATC CGCGTACCGG AGGCTAAAGG AATTTTGATC
TTTAGCTCAG TCGGATATGC CACATTTGAA GTCGAAATTA AAGATCAGAA GCCCATAATT
GTAACCATGA CTGAGCAGGC ATCAGACTTA CGGCAGGTAG TAGTAATTGG CTATGGGGCG
GTTAAAAAAA GTGATCTTAC CGGAGCAGTA TCTGTGGTAA AAATGAAAGA TATTGAAAAT
GTACCTGTAA TCCGTGTCGA CCAGATGTTA CAGGGCAGAA TTGCGGGTGC AGAAATTGTG
AGCACTACCG GCGAACCTGG TGCTGGTACT TCTATACGTA TACGGGGAAC CCGCTCTATT
TCGGCAACCA ACGAGCCCTT ATATGTCGTA GATGGTGTGC TCGATGCGAT AAATAGCCTG
AATGACTTGA ACCCAAGTGA TATTGCATCT ATACAGGTAC TTAAAGACGC ATCATCTACA
GCGATCTATG GCTCCAGAGG AAGTAACGGT GTTATTGTTA TCACTACAAA GATGGGGGTG
AATGGTAAAA CCAGCTTTAT TTATCATGCA GATTATGGTA GAGCACAATT GCCCCGTTTC
CTGGACCTGA TGAATGCTGA GGAATTTGCA AATCTGCAAA ACGATCGTTT TTTCTTTTCT
CTTGGGGTCA ACCAAAGTAA GCCACTTGAA GAATACCCTT ATAAGAATCC TATTGGCCTG
GGCGAAGGTA CCAATTGGAC AAAAGTAATT TCACGTTCAG CACCGTACCT CAACCATACT
TTTTCTGCAT CAGGAGGCGA TAAATCAACC AGTTATTATT TCTCTGCCAA TTATAACAAT
ACGCAGGGAA TTATCATAAA TAGCGGATTG AAACGCTATC AGGCCCGGCT GAACCTTGAT
AAAACGATCA ATAAATATGT AAAATCCGGT CTCAGGCTCA ACTACGCTTA TCTGGACCAG
AATGTAAACA AGGCCGATAT CGGTACAAGT ACCCTGTGGT ACAAATCCAC TGTATTTTTA
TCACCTACCA TAGCTGCATA TAAAGCCGAT GGCAGTCTGA ACGACTTTAA TACACAATGG
TATACAGGCA CGCTGTTTGA CTCGCCTTTG GCCAATTCGC TGCTTCAGGA AAAATTTCAG
CTAAGAAAAA CCCTTTCTTC GTCGTTGTTT GTAGAAGTGA GTCCTGTTAA ATCTTTGAAA
ATCAGGAGTT CGTTGTCGTT TTATGATTTC AATAGATTTG ACAATACCTT TTATCCCTCA
ACGCTCCCTA CCAGGATGAG TAAGAATTCA GGGGCTTATG CCTATAAGTT TTCGACAGAG
GACAATAACA TTTTGAATGA GAACACCATC AGCTATAACA AGGTATGGAA CAAGCATCAT
CTTGATGCCT TGTATGGCAT CACCTTTCAA TCGTACTGGA CATCGAGTTT CTCAGCCAGC
GGTGATGGTT ATTTTATAGA TGATATCGGT ACAAATGATC TGGGGGCTGT TCCATCAAAA
GAAACACTAG CGGTAGGGTC GGGCCTGTCC AGACAAAAGA AGGTTTCCAA CCTGGCCCGG
ATCAATTATA ACTACGATGG CCGGTATTTT CTAACTGTAA CTGCAAGGGC CGACGCATCT
TCAAATTTTG CGTCTAATCA TAAATGGGGA TATTTTCCTT CAGCAGCCTT TAAATGGAAC
ATCCTAAAGG AAGGTTTTAT GAAAGGTGTA AAACATATTG ATGAGCTGGG ACTGCGTATA
AGTGCGGGCA TCTCCGGTAA CGATGCCATT TCGAGGTATC AATCTTTGTC GCAGCTAAAC
TCCAGTTCTG GCGGATATAT ATTTGATGGG GTTACTCCGG TTTCCTACTT TCCGATCAGA
ATTTCTAATG AAGGACTGAC CTGGGAGAAA ACAGCCTCTT ATGATATAGG ATTAGACCTT
TCTGTTTTAA AGAATCGTCT TTCCTTAACA TTTGATGCTT ATACCAGTAA AACTACCGAC
CTGCTGCTTA CCGTACAATT GCCTACACAG GTGGGTTACG TGAGTCGGTT GACAAATATT
GGACAAACAT CAAACAAAGG AGCGGAGCTG ACCATTGAGT CAAAAAATAT TGTCAAAAAA
AACTTTACCT GGTCAACCAC GCTCACTTTT GCGCATAATA GTCAAATGGT TGATGATATA
GGGGGGCTGG ACAGGATCAT TGCTTATGCC AATCCTTTTG GAGCACAGTA TATGATGTAT
GGTTATGAAA AGGGAAGACC ACTGAATGCG CTGTGGGGCA TGCAATATGG TGGAGTCTGG
AAGTCTCAGG CAGAGATCGA TCAGAATAAA ATTGATAAAA AATATGCTTC ATCAGCTGTT
AATTTCTATT CTCCCGGTCG CCAACGCTAT ATTGACCAGA ATAATGATGG TTTGTTAGAC
AACAGCGACC TGATTTATTT AGGTGATTCA GACCCGAAAC TGTATGGTGG GATCCAGAAC
ACTTTTAACA TTCATGGATT TAATTTGGGT ATTTATCTTA ATTATTCTAT TGGCGGAAAA
ATTTACAATC CGACAGAATT ATTTATGGGC ACCGGGACTT ATCTGACCAA TCAGTTTAAG
TATATGGTGA ATGCATGGCA TCCAATACGT AATCCAACTT CCGATTATCC GCGTGCCGAT
TCAAAGGATG ATATTCCGAA TGACAGGTTT TTACATGATG CTTCTTTCCT GAGGTTGAAG
AATGTTTCTC TCGGTTATAC ATTTAACCTG CTGAAACTTA CCAACAACAA TATAAAATCG
CTTTCGCTTA CAGCCAGCGG AAACAACCTT TACCTGCTGA AATATTATAA CGGTTATGAC
CCGGAAGTAT CCACCCAAAG TGGCGGATCA ACCATTAGAA GGATGGATAA CGGAGCCTAT
CCAAACAGCA GGACAGTGAC TTTCAGTGCT GAAATCAAAT TCTAA
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| Protein sequence | MQLNFNIKEL LCSKILPNKQ PNNYLGLFRI PPDTKNLIMR LNIIVLFLTL SFLQISAKSY
SQNINLTGQN IPLEKVFASI EQQSGYFFFY NYKELKDARP VTVGLKNVPL NEALKKILQG
QPYTYAIAVS NKSIVVKKVS QPVNATLPVE SVIIQGKVID EKGLTLPGVS VKLKGTAIVA
ITDKDGKYSI RVPEAKGILI FSSVGYATFE VEIKDQKPII VTMTEQASDL RQVVVIGYGA
VKKSDLTGAV SVVKMKDIEN VPVIRVDQML QGRIAGAEIV STTGEPGAGT SIRIRGTRSI
SATNEPLYVV DGVLDAINSL NDLNPSDIAS IQVLKDASST AIYGSRGSNG VIVITTKMGV
NGKTSFIYHA DYGRAQLPRF LDLMNAEEFA NLQNDRFFFS LGVNQSKPLE EYPYKNPIGL
GEGTNWTKVI SRSAPYLNHT FSASGGDKST SYYFSANYNN TQGIIINSGL KRYQARLNLD
KTINKYVKSG LRLNYAYLDQ NVNKADIGTS TLWYKSTVFL SPTIAAYKAD GSLNDFNTQW
YTGTLFDSPL ANSLLQEKFQ LRKTLSSSLF VEVSPVKSLK IRSSLSFYDF NRFDNTFYPS
TLPTRMSKNS GAYAYKFSTE DNNILNENTI SYNKVWNKHH LDALYGITFQ SYWTSSFSAS
GDGYFIDDIG TNDLGAVPSK ETLAVGSGLS RQKKVSNLAR INYNYDGRYF LTVTARADAS
SNFASNHKWG YFPSAAFKWN ILKEGFMKGV KHIDELGLRI SAGISGNDAI SRYQSLSQLN
SSSGGYIFDG VTPVSYFPIR ISNEGLTWEK TASYDIGLDL SVLKNRLSLT FDAYTSKTTD
LLLTVQLPTQ VGYVSRLTNI GQTSNKGAEL TIESKNIVKK NFTWSTTLTF AHNSQMVDDI
GGLDRIIAYA NPFGAQYMMY GYEKGRPLNA LWGMQYGGVW KSQAEIDQNK IDKKYASSAV
NFYSPGRQRY IDQNNDGLLD NSDLIYLGDS DPKLYGGIQN TFNIHGFNLG IYLNYSIGGK
IYNPTELFMG TGTYLTNQFK YMVNAWHPIR NPTSDYPRAD SKDDIPNDRF LHDASFLRLK
NVSLGYTFNL LKLTNNNIKS LSLTASGNNL YLLKYYNGYD PEVSTQSGGS TIRRMDNGAY
PNSRTVTFSA EIKF
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