| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1378 |
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| Symbol | |
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| ID | 8252478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1636686 |
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| End bp | 1639121 |
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| Gene Length | 2436 bp |
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| Protein Length | 811 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935031 |
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| Product | LmbE family protein |
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| Protein accession | YP_003091654 |
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| Protein GI | 255531282 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.455016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTTC GTTTATACCT GCTTGTTATT GCCGCAGTTG TTCCTTTTTT AAGCAAAGCA
CAAAACATGC AGCAGCTAAA TGCTGCTGAA ATTAAACAGG GGCTGGAAGC ATTAAACGTT
ACAGGAAGTG TACTGTACAT CGCTGCACAT CCGGATGATG AAAATACCCG TCTGCTGGCC
TATCTGGCAA AAGACAAAAA AGTAAGGACA GGCTATTTGT CATTAACCCG GGGCGATGGG
GGACAAAACC TGATCGGTAA TGAACAGGCT GAATTGCTTG GCCTGATCCG TACCCAGGAA
TTGCTTGCTG CCCGTCGTAC TGATGGTGCC GAACAGTTTT TTACCCGGGC AAATGATTTT
GGTTTTTCTA AAAATCCTGA AGAAAGCTTT AAAATCTGGG ATAAAGCTAA AATATTGGCA
GATGTGGTAT GGGTGATCAG AAAGTTTCAG CCTGATGTGA TCATCACCCG TTTTCCTGAA
GACGGACGTG CTGGTCATGG CCACCATTCT GGTTCTGCCA TCCTTGCACA TGAAGCTTTC
TCGGCTGCTG CGGATCCGAA ACAATTTCCA GAACAACTGG CTTTTGTTAA GCCATGGCAG
GCCAAACGCA TTTTATGGAA TACTTTTAAT TTTGGCGGCA ACAATACCAC CGCCGACGAT
CAGTTAAAAC TCGATGTAGG CCTGTATAAC CCATTACTTG GTAAAAGTTA CGGGGAAATA
GCAGCAGAAA GCAGGTCTAA CCATCGTAGC CAGGGCTTTG GTTCGGCCAG GCAACGTGGT
TCTTCTACAG AATTTTTTAC GCTGGTAGCC GGCGAAAAAG CTACCAAAGA TATATTTGAA
GGGATTGATT TTTCTTTAAA AAGGCTGCCG GGCAGTGCTG CCATACAGCA ACTGCTAACC
GAGATCAACG CAACTTATGA TGCTGCTGAT CCAGCTGCAT CCATCAACAA ACTGTTAAAA
TTAAGAACGC TGGTAAAGGA CAAACCATTT AAACATGAGC TACTGGACGA CCTGATCCTG
GCCAGTGCAG GTATCTGGTT TGAAAGTGCT GCGGCAAATT CAGCGTATGC CTTAAATCAA
CCTGTAAATG TAAAAGTACA GGGTATTGCC AGGGTAAAGC CAGGCTTTCC TTTGGCTATC
AGTCTTGAAG AAAGCAACAG CGGGGCTGCT TTCAGTTTAG TACCCAACAA ATTGATGTCG
GAAGACAAGA CCATTACTAC CAATGACATT GGCCTTTCCC AGCCTTACTG GCTGGAAAAA
CAACATCCGC TGGGCTCCTT TGTGGTAGAT GACCAGACTA AAATCGGACT GCCCGAAAAC
CCGGTCGGAT TAAGTGCCCT GTTCAAAATA AAAATTGGTG ATGCAGTCAT TGAAAAGCAG
CGTCCAGTAG TCTACAAGTA TACCGATCAG GTACGTGGTG AGGTTTATCA ACCCCTGGTT
ATTGCACCAC CGGTTACTGC TACACTTACA GAAAAAGCGT ATGTTTTTAA TGGCAATGAG
GCTAAACAAA TTGCGGTTCA GCTCAAGAGC TTTAAAGATA ATGCCACAGG CCAGCTGCAG
CCACTGGTTC CGGCAGGCTG GAAGGTGAGT CCCGAGAAAG CCAGCTTTAC TTTAGCCAAA
GGCGAGGAGC AGGTTCTGGA ATTTACGGTT AGCCCCGCAG GCCATATTTC AGGAGGCAAT
TTAACCTTTC AGGTGATTTT AGACGGTGAA ACTTATGATA AAGGTTTACG CGTGATCAAT
TATGAACATA TTCCTTTGCA AACACTTTTT CCACCGGCTG TGGCCAGGGT AGATAAAATA
GATTTGAAAC TGGCTGGAAG GCGAATTGGT TATATTGCCG GGGCGGGCGA TCTGATACCC
GAATCGCTGA AACAAATCGG ATATGAAGTG GTAAATCTTA ATGAGAACCA GGTGATCAAT
ACCGATCTTT CGGGTTTTGA TGCCATTGTA ACTGGTGTCC GTTTGTACAA TGTAAATGAT
CAGATCAGGA GCATGCAGCC TAAGCTGATG AAATATGTAG AAAATGGCGG TACCTTACTT
GTACAGTACA ATGTAAATAA TCCGCTTAAA CTGGAAAATA TTGGCCCTTA TCCCTTCAGG
CTATCGCGTG ACCGTGTTAC AGAAGAAGGC GCAAAGGTGG GTATCCTTAA GCCCGAAATT
CCGGTATTAA ATTATCCGAA TAAAATTACA GCTAAAGATT TTGAAGGCTG GATCCAGGAG
CGGGGATTGT ATTTTGTAAC GGATGCAGAC CCTAAATATA CCGCTGTACT GAGTATGAAC
GACCAGGGCG AAAGTGCCAA AACAGGTGCC CTGATTGTAG CTGATTATGG AAAAGGCAGA
TTTGTATATA CCGGTCTTTC TTTCTTCAGA CAGTTGCCGG CAGGCGTACC CGGTGCTTAT
CGTTTATTTG TAAATCTCTT ATCGGGGAAA AAATAA
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| Protein sequence | MKFRLYLLVI AAVVPFLSKA QNMQQLNAAE IKQGLEALNV TGSVLYIAAH PDDENTRLLA
YLAKDKKVRT GYLSLTRGDG GQNLIGNEQA ELLGLIRTQE LLAARRTDGA EQFFTRANDF
GFSKNPEESF KIWDKAKILA DVVWVIRKFQ PDVIITRFPE DGRAGHGHHS GSAILAHEAF
SAAADPKQFP EQLAFVKPWQ AKRILWNTFN FGGNNTTADD QLKLDVGLYN PLLGKSYGEI
AAESRSNHRS QGFGSARQRG SSTEFFTLVA GEKATKDIFE GIDFSLKRLP GSAAIQQLLT
EINATYDAAD PAASINKLLK LRTLVKDKPF KHELLDDLIL ASAGIWFESA AANSAYALNQ
PVNVKVQGIA RVKPGFPLAI SLEESNSGAA FSLVPNKLMS EDKTITTNDI GLSQPYWLEK
QHPLGSFVVD DQTKIGLPEN PVGLSALFKI KIGDAVIEKQ RPVVYKYTDQ VRGEVYQPLV
IAPPVTATLT EKAYVFNGNE AKQIAVQLKS FKDNATGQLQ PLVPAGWKVS PEKASFTLAK
GEEQVLEFTV SPAGHISGGN LTFQVILDGE TYDKGLRVIN YEHIPLQTLF PPAVARVDKI
DLKLAGRRIG YIAGAGDLIP ESLKQIGYEV VNLNENQVIN TDLSGFDAIV TGVRLYNVND
QIRSMQPKLM KYVENGGTLL VQYNVNNPLK LENIGPYPFR LSRDRVTEEG AKVGILKPEI
PVLNYPNKIT AKDFEGWIQE RGLYFVTDAD PKYTAVLSMN DQGESAKTGA LIVADYGKGR
FVYTGLSFFR QLPAGVPGAY RLFVNLLSGK K
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