| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1364 |
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| Symbol | |
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| ID | 8252464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1625186 |
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| End bp | 1625758 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644935018 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003091641 |
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| Protein GI | 255531269 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.767418 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAAAGT ATAGCAAATT TACTGATCTT GAACTGGTAG CCATGCTAAA CAAAGGCGAT
CAATTGGCTT ATACAGAAAT ATTTGAGCGC TATAAGATTA TATTATACAA ACATGCCATT
CGTCTGATCA ACGACCAGGA AGAAGTAAAT GACATTATAC AGGAGTTATT TCTTACGTTA
TGGCAAAAAA AAGGGACAAT TATACTTACT ACCTCGCTTT CATCCTATCT TTACCAGTCT
GTACGCAACA GGATATTTGA TTTCATTGCA CATCAGAAAG TAGAAAACAA TTATCTGGAT
TCAATCCGTG ACTTTGCCCT AAATGGCCAG CTCATTACAG AAGATCAGAT CAGAATGAAA
GAACTGAATA TCATTATTGA AAAAGAAATA TCAGCACTTC CAGAACGGAT GCGAAAGGTA
TTTGAGATGA GCAGACTTAC AGATCTGAGC TATAAGCAAA TTGGAGAACG GCTGGATATA
TCAGACAAAA CTGTGAAACA ACAAGTATAC AATGCCGTAA AGATTCTAAA GTTAAAGATC
AATTATATTA TTACCATCCT GCCTATTATC TAG
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| Protein sequence | MAKYSKFTDL ELVAMLNKGD QLAYTEIFER YKIILYKHAI RLINDQEEVN DIIQELFLTL
WQKKGTIILT TSLSSYLYQS VRNRIFDFIA HQKVENNYLD SIRDFALNGQ LITEDQIRMK
ELNIIIEKEI SALPERMRKV FEMSRLTDLS YKQIGERLDI SDKTVKQQVY NAVKILKLKI
NYIITILPII
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