Gene Phep_1352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1352 
Symbol 
ID8252452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1609202 
End bp1609744 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content44% 
IMG OID644935006 
Producthypothetical protein 
Protein accessionYP_003091629 
Protein GI255531257 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAAATT TAGTTGCACG GCTCTGGGAG CATAAAGATT GCAAAGGGGC ACATTTAGAT 
TTAGGGGTTG GTTCTTACCG GGCTGAAAAC CTTGGCAGTT TTGAATATAA AACAAGCGCA
CTTGAAGTTC CTCTGGGATT GAACGTGACA CTTTTCGGCC ATTGGGCATG CGACCCAAAA
GATAAATTGT TTGATTATCA CCCAGGCAAA TGGGACTACG TTGGTGATGA CTTCAATGAC
AGGACACGCA GTGTTGTCGT TCTTCCGAAA AGTATATTTT ATGTAGCTAA TGCTGCTGGC
TTTAACTGGA TCCACGAAAC TCACCCCATC CCTGCAGGGT ATGATTTATA TTGTGACGAA
GAGACTTGTA ATAAAGGATC CTGGGGCGTA TGGATTGAGA ATGGATCAAC GCTCAGGATA
CGTGTAAATC ATGGTGGCGG TTGGTGCGGT GTTGCAATAA CATTGAAAGA AAATGGCGGG
CAGCCATCCA AACTTCTTTT TGGGTCGCAG GATCATAGAA CGGTAAAATT GGGAGATTCC
TGA
 
Protein sequence
MLNLVARLWE HKDCKGAHLD LGVGSYRAEN LGSFEYKTSA LEVPLGLNVT LFGHWACDPK 
DKLFDYHPGK WDYVGDDFND RTRSVVVLPK SIFYVANAAG FNWIHETHPI PAGYDLYCDE
ETCNKGSWGV WIENGSTLRI RVNHGGGWCG VAITLKENGG QPSKLLFGSQ DHRTVKLGDS