Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1349 |
Symbol | |
ID | 8252449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1606248 |
End bp | 1607774 |
Gene Length | 1527 bp |
Protein Length | 508 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644935003 |
Product | protein of unknown function DUF187 |
Protein accession | YP_003091626 |
Protein GI | 255531254 |
COG category | [S] Function unknown |
COG ID | [COG1649] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAAACTT CTTTTAACCT CCTTAAAAAA GGTCTGCTTG CACTGTGCTG CAGCAGCCTG TTTTTTTATT CCTGCAGTAC CAGTAAGAAA GTTAGTACTG TTGCTGAGCC TAAGGTTCAG TCAGATCTGC CCAAGGCAGC CAAAGAGTTC AGGGCGGCAT GGGTCGCTTC GGTCGCCAAT ATCAACTGGC CTTCAAAACC TGGTTTAAGT ACTGCTGAAC AGCAAAAAGA GGCCATCTTT TTACTCGATT TTCTGAAAAA TAACAACTTC AATGCGGTCA TATTTCAGGT AAGACCGCAG GCAGATGCAC TTTATAAAAG TAACCTGGAA CCCTGGTCTG TTTTTCTGAC CGGTAAGCAG GGACAGGCTC CCGATCCTTA TTATGATCCT TTGCAATTTT GGATCGAGGC GGCACATGAT CGCGGACTTG AGCTGCATGT CTGGCTTAAT CCATATCGTG CCCATCACAG TTCAGGAAAA ACAATCACTG AAGCATCCAT TGTTAAAAAG CGTCCCGACC TGGTGGTGAA GCTGAAAGAT GGACAGTACT GGATGGATCC AACCAATAAA GGTACACAGG ACCATGCTGC TGCAGTGGTT AAAGATATTG TAAAACGCTA TGATATCGAT GGTGTACATT TTGACGATTA TTTTTATCCC TATGACTCTT ATAACGGAGG AGCAGATTTT CCTGATGAGG CTGGCTGGGC CGCTTATCAG AAAAGTGGAG GTAAACTTTC CCGTGGCGAT TGGCGCAGGC AGGGGGTAAA TCAGTTTATA GAAAGGGTTT ATAAAGAGAT TAAAGCTGAA AAGAAATATG TAAAGTTTGG TTTAAGTCCT TTTGGTATAT GGAAACCAGG TTATCCTGCG TCTATTGAGG GTATGGATCA GTACAATAAA TTGTACGCTG ATGCAAAACT CTGGTTAAAC AAAGGCTGGA TTGATTATTT TACCCCACAA TTGTATTGGG GCGTAAATAC GATAAAGCAA AGCTTTCCGG TATTACTAGG CTGGTGGGCA AGTGAAAATA CGATGGGCAG GCATTTGTGG CCGGGTATGA ACGTAGGTTT AGGTGGTGAT GACAAAAATG TAGATGAGGT GATCAACCAG ATCATGATTA CACGTGGTAT GGTCCCTAAT AGTATGGGTG CGGTACACTG GAGTATTGCC GGTTTAACCA AACACGAAAA ACTGATTAAA GGAATTGTAG AAGGCCCTTA TAAAAAACAG GCCCTTGTTC CGGCCAGCCC ATGGCTGGAT GATAAGGCCC CGGCGGCCCC TGTTGTAAAA ACAGATGTGC AGCAGGGACA GTTAAAGATC AGCTGGAACC ATGCTGATGC GAAAGATGTA TTCAGATGGG TGGTTTATTA TCAGTATGGC AATACCTGGA ATTATGTGGT GCTGAACCGT CAGGACAGAT TTTTGGTAAA GTCCATACTG GAGGCTGGTG TTAAACTGAA TAAAATTGCT GTAAGTGCAG TGGACAGAAC GGGGAATGAA AGTGAAAAAA TGGCCGTTTT GCTCTAA
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Protein sequence | MKTSFNLLKK GLLALCCSSL FFYSCSTSKK VSTVAEPKVQ SDLPKAAKEF RAAWVASVAN INWPSKPGLS TAEQQKEAIF LLDFLKNNNF NAVIFQVRPQ ADALYKSNLE PWSVFLTGKQ GQAPDPYYDP LQFWIEAAHD RGLELHVWLN PYRAHHSSGK TITEASIVKK RPDLVVKLKD GQYWMDPTNK GTQDHAAAVV KDIVKRYDID GVHFDDYFYP YDSYNGGADF PDEAGWAAYQ KSGGKLSRGD WRRQGVNQFI ERVYKEIKAE KKYVKFGLSP FGIWKPGYPA SIEGMDQYNK LYADAKLWLN KGWIDYFTPQ LYWGVNTIKQ SFPVLLGWWA SENTMGRHLW PGMNVGLGGD DKNVDEVINQ IMITRGMVPN SMGAVHWSIA GLTKHEKLIK GIVEGPYKKQ ALVPASPWLD DKAPAAPVVK TDVQQGQLKI SWNHADAKDV FRWVVYYQYG NTWNYVVLNR QDRFLVKSIL EAGVKLNKIA VSAVDRTGNE SEKMAVLL
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