| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1344 |
|---|
| Symbol | |
|---|
| ID | 8252444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1602161 |
|---|
| End bp | 1603519 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644934998 |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003091621 |
|---|
| Protein GI | 255531249 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.832102 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAA AAGACCGTCT TGCCTTATAT TTTACCCTAA GCAGTACGCT GATCATGATG
GTCATCTTAT CGGCCATTTA TTTTACCTTC CTTAAATTTC TGGAGGCTGA TTTTTTTGCC
CGCCTAACCG ACCGTACCAT GGTTACGGCA AAGCTGTACC TGGAAGCGGA TGAAATTTCG
CAGGACTCGC TCAATAAGGT AAGAAGCATG TACCTGGAAA AATTAAACGG AGAGGTGATC
AGGATCTATA ATTCCAAAAA CACTGCGGCA TTTATTGGCG ATGACCAGCA ATACTGGAGC
AACAGCACCA TCAATAAAGT AAGAGATGCG GGTAAATTGA GGTTTAAAGA CGGAGAAAGA
CAGGTTGTGG GCATTTACTA TAAAGATAAC CAGGGCGATT TTGTGATCAT TGCTTCGGCA
GTAGACCAAA GCACCCATTA CCGCCTTGAT AAATTGCGCA GGATCATGCT GATCATCTTT
GTGATCGTAG TTATCGGACT GCTGCTGTCG GGCCGCTGGA TTGCCAACAA GATCTTAAGC
CCTTTGGCAC ATTTTATTGA GGAGGTAAAA CAGATTAAAT CCAGTAATCT TCATTTCAGG
GTGCATGAAG GGAAAAACAA AGATGAAATT AACTTACTGG CCCAAAATTT CAATAACCTG
ATGGAGCACC TGGAACAGGC TTTTGTATTG CAAAGAACCT TTGTGGCCAA TGCTTCGCAT
GAGCTGAGGA CACCCATTAC CAGGATGATC ATTTCTGCCG AGCTTTCCCT TTCCCAGGAA
AGGGAAAAAC AGGATTACCG TAAAGCCTTA AGTTCTGTAC TGGAAGATGC CGAAAAAATG
GAAGGTATTA TCACAGGATT GGTGAACCTT GCACAGACCG ATCTGGAATT TGCCTCATCA
CAGCTTAGTC CGGTCCGCAT TGATGAAACC TTATGGACAC TGCAAAATGA ATGGAAGGAG
TCGGCCGCAC TTAACCTCCG GATCGACATG CAGAACCTTC CTGAAAATGA GCGTGAACTG
CTGATTAAAG CCAACCCTGT TCTGCTTCAT ATTGCACTCA ATAACATCAT ATCCAATGCT
TTTAAATTTT CGGACAACAA ACCCGTCTAT TGCCTGCTTG ATATGCAGGA CACAGCAATT
GAACTTTCTT TTACAGACCA AGGGCCCGGC ATAGCAGAAG ACGCATTTAC AGAAATATTT
AAGCCCTTTT ACAGTGCTAC CACAGAAAGC AGGCACAGGG GAAATGGCAT GGGGCTTTAT
ATGGCCCATA AAATCATTAC TCTTTATAAA GGCCAAATCA GTGTAATGTC GGAAAAAGGC
CATGGCACTA CCATTAAGGT GGTTTTCCCT AAACTTTAA
|
|---|
| Protein sequence | MKIKDRLALY FTLSSTLIMM VILSAIYFTF LKFLEADFFA RLTDRTMVTA KLYLEADEIS
QDSLNKVRSM YLEKLNGEVI RIYNSKNTAA FIGDDQQYWS NSTINKVRDA GKLRFKDGER
QVVGIYYKDN QGDFVIIASA VDQSTHYRLD KLRRIMLIIF VIVVIGLLLS GRWIANKILS
PLAHFIEEVK QIKSSNLHFR VHEGKNKDEI NLLAQNFNNL MEHLEQAFVL QRTFVANASH
ELRTPITRMI ISAELSLSQE REKQDYRKAL SSVLEDAEKM EGIITGLVNL AQTDLEFASS
QLSPVRIDET LWTLQNEWKE SAALNLRIDM QNLPENEREL LIKANPVLLH IALNNIISNA
FKFSDNKPVY CLLDMQDTAI ELSFTDQGPG IAEDAFTEIF KPFYSATTES RHRGNGMGLY
MAHKIITLYK GQISVMSEKG HGTTIKVVFP KL
|
|---|
| |