| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1342 |
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| Symbol | |
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| ID | 8252442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1599696 |
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| End bp | 1600793 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934996 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003091619 |
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| Protein GI | 255531247 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.754197 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAATA CATTAAAAAA CATCGGTATG TCCATCACTT TGTCTGTTGC GCTGTTCCTA
TCCAGCTGCA CAGAACAGGT AAAAGAAACG CCTAAAGATG AAAAGTTTGA ACTGACTGAC
GCAGTGCTGG AAAGACTGCA GATAGATACG GTAAAAGGTG CCGATAACCA GACCGACATC
AACTTCTCGG CAAAAATTAC GGCCAACGAA GAAAAAATGG CTAAAATATA CCCCATGGTA
AGCGGACAGC TACAAAATGT ACCGGCAAAG CTGGGCGACC GTGTAGACAA GGGACAGTTA
CTGGCTACCA TGACAAGTGC CGAAATGGCC GGCTTTGACA AAGAGGCCAT CAGCTCTTCG
GCTGAATTAA GAAATGCACA GCACAACCTG AAACTTACTG AAGACCTGTA CAATAGCGGC
CTTGCATCAG CCCGGGAACT GGAACAGGCC AAAAATGAAC TGCTGGTAAA ACAAGCTGAA
GATAAAAGGA GCCGTTCTAT TCTGAACCTC AACGGGGGCA ATAAAAATGG GATATATACC
TTAAGATCAC CTTTATCTGG TTTTATCATC GAAAAAAATG TAACCAGTAA CATGCAGGTA
AGGCCAGACA ACAACCAAAA TCTGTTTACG GTGGCCGACC TTTCCGATGT ATGGGCCCTG
ATCAACATTT ATGAAAGCGA TATCTCTAAG GTAAAAGAAG GTGACGAAGT GAACATTTCC
ATTCTTTCCT ATCCGGACAA ACCTTTTAAA GGCAGGATCA GTAAGATCTA TAACATGCTC
GACAACGACA GTAAAGTAAT GAATGCACGG GTGCTGATCA ACAATCCCGG TTATTTACTA
AAACCAGGCA TGATGGCCAG TGTACAGATC AATACAAAAA ACGGGACCAG TTTACCCTCG
GTAAATGCCA ATTGTCTCAT TTTCGACAAC AATAAATATT TTGTACTGGT GCTGGACAAA
GTAAAGAAAA TCAGGATCCA GGAAATAGAG CTGGGCAGGA AATTTGAAGA CAAAACCTAT
GTGAGCAAAG GGCTGAATGC CGGCGACCGT GTGGTAGCTT CTAAACAGCT CTTCCTTTAC
GATAGCCTCA AACCATAA
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| Protein sequence | MQNTLKNIGM SITLSVALFL SSCTEQVKET PKDEKFELTD AVLERLQIDT VKGADNQTDI
NFSAKITANE EKMAKIYPMV SGQLQNVPAK LGDRVDKGQL LATMTSAEMA GFDKEAISSS
AELRNAQHNL KLTEDLYNSG LASARELEQA KNELLVKQAE DKRSRSILNL NGGNKNGIYT
LRSPLSGFII EKNVTSNMQV RPDNNQNLFT VADLSDVWAL INIYESDISK VKEGDEVNIS
ILSYPDKPFK GRISKIYNML DNDSKVMNAR VLINNPGYLL KPGMMASVQI NTKNGTSLPS
VNANCLIFDN NKYFVLVLDK VKKIRIQEIE LGRKFEDKTY VSKGLNAGDR VVASKQLFLY
DSLKP
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