| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1341 |
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| Symbol | |
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| ID | 8252441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1596549 |
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| End bp | 1599668 |
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| Gene Length | 3120 bp |
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| Protein Length | 1039 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934995 |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003091618 |
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| Protein GI | 255531246 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAAT TCATTAAGTC TATCATAAAT TTTGCCCTTA AAAATAAATA TTTCATTTTT
TTTGCAACGT TTATCCTGGT CCTTGCCGGT TATTTAAGCT TCAAGCATAC CACTATTGAG
GCTTTTCCTG ATGTGACCAA TACCAATATC ACCATTATTA CCCAATGGCC TGGCAGAAGT
GCTGAAGAGG TTGAAAAATT TGTTTCACGT CCGCTGGAAA TTGCCATGAA CCCTACCGAA
AAAAGAACCA GTATCCGCTC TTCTTCCCTC TTTGGTTTAT CGGTGGTAAA GATCACATTT
GAAGACAATG TTGATTACCA GTTTGCCCGC GTACAGGTAA ACAACCATCT TGATGAGGCA
GACCTTCCAT CCGGAGCCAG GCCCGAAGTA CAGCCCCCTT ACGGTCCTAC AGGCGAAATA
TTTCGCTATA CACTAAAAAG TGATAAGCAA TCGGTAAGGG AATTAAAAAC GCTGCAGGAC
TGGGTGGTAC AACGCGAGCT GCTCTCTGTT CCGGGAATTG CCGATGTGGT TAGTTTTGGT
GGCGAAGTTA AAACCTATCA GATTACGGTA GACCCTCAAA AGTCGTTACA ATATGGCGTA
ACCGCTACTG AGCTATTCAA TGCTGTTTCC AAAAGCAATA TCAATGTTGG AGGTGATGTA
ATAGAACAAA GTGGCCAGGC CTATGTAGTG AGGGGTATAG GGGTGCTCAA TAACATTGAT
GAAATTAAAA ACATTATTGT AGATAATTTT CATGGGACAC CTGTGTATGT TAAAACCATC
GCCGAGGTAA CAGAAGCTGC CCTTCCCCGC CTGGGACAGG TAGGCCGCGA CCGTGATCCG
GATGTGGTAG AGGGTATTGT GGTGATGCGT AAGGGCGAAA ACCCCAGCGA AGTGATCCGC
GCCCTGAAGG AGAAAATAAA AGATGTTAAT GACAACATTT TACCGGGCGA TGTAAAAATA
AGCCCGTTTT ATGACCGCGA AGATCTGGTC AATTTTGCAA CCCATACCGT AATGCACAAT
ATGCTGGAGG GTATCATCTT CGTAACACTG ATCGTGTTCC TTTTTATGGC CGACTGGCGT
ACTACACTTA TTGTTTCAGT GATTATCCCG CTTGCATTGC TCTTTGCTTT TATTTGCTTA
AAGCTAAAGG GGATGTCGGC CAACCTCCTT TCTATGGGTG CCATTGATTT CGGGATCATC
ATTGATGGTG CAGTAGTCAT GGTAGAAGGG ATTTTTGTGG CGCTCGACTA TAGTGCCCAT
AAAAATGGGA CAGAGAAATT CAACCGCATG AGCAAACTTG GCATCATCAA AAAAGCTTGC
CTGGAAAACG GTAAGGGCAT CTTTTTTGCC AAACTGATCA TCATTACCGG CCTGATGCCC
ATTTTTACCT TCGAAAAAGT AGAGGGCAAG ATGTTTTCTC CGCTGGCCTG GACTTTAAGT
TTTGCCCTAC TGGGTGCTTT GTTATTGACA TTTACCCTTG TACCTGCCAT GGCCAGCGTA
TTGCTAAACA AAAATGTAAA GGAAAAGCAC AATATCTTTC TGGAATATCT TACCAGGGGG
GTAATGAAAA CTTACAACAG GGCATTTAAA GCCAGAAAAA TTGTTTTTAT CAGTGCTTTG
GTCGTTTTGG TCATCGGTTT TTTCAGTTTC AGGTTCCTGG GTACTGAGTT CCTGCCTTCA
TTGGATGAAG GCTCTATTTA TGTAAGGGCC AGTGCCTCGC TTAGCGTTTC CCTGAATGAA
ACAAAAAAAC TGAGCAATGA GATGCGAAAG ATCTTTTTGA GCTTTGAAGA AGTAAAGCAG
GTGATGTCGC AAACAGGCAG GCCCAATGAC GGTACGGATG CAACAGGTTT TTATAATATG
GAGTTCCTGG TAGATATTTA TCCCAAATCG GAGTGGAAAC GAAAAGAGAG CAAAGAACAA
CTGGTACAAC GTATGCAGGA AAAGCTGAAA GGTTACCCTG GTATCAGCCT GAATTTTTCC
CAGCCGATAT CTGATAACGT TGAAGAAGCC GTATCGGGTG TAAAAGGCTC TATTGTGGTA
AAGATGTTTG GCAATGACTT CAGTTTTATA GAACAACAGG AAGAAAAAAT AGCGCACATT
TTAAAAACTG TTCCCGGCAT TGAAGACCTT GGCATTTTAA GAAACCTGGG CCAGCCGGAA
CTCAGGATTA ACCTGGACCA GAGCAAAATG GCCCTGTATG GGGTAACCAC GGAAGATGCC
AACTCCATTA TCGAAATGGC CATTGGCGGT AAAGCGGCTA CCCAGATCTA TGAGGGCGAA
AGAAAATTTG ACCTCAGGAT CCGTTATCCT GAAGATTTCA GGAATGATGA GGCTTCAATA
GCTGCCCTGC GTATCCCTAC CCTTTCAGGG GCAAAAGTAC CACTCAGTGA AATATCCACT
ATCCGGAAAA TCACCGGTCC AAGCATCATT TACAGGGATA AACACCAAAG GTATGGTGCT
ATAAAATTTT CTATACGTGG CCGGGATATG GGCAGTACCA TAGCCGAAGC GCAAAGAAAA
GTAGCAGCAG AGATCAAACT GCCAAAAGAA TATAAGCTGG AATGGGCAGG CGATTTCGAG
AACCAGCAAA GGGCAACGGC CAGACTGTCG ACCGCAGTTC CGATCAGTTT ACTGCTGATC
TTTTTTATCC TGTTTGTGCT GTTCGGAAAT ATAAAAGATG CCCTTCTTGT TTTAAATAAC
GTACCTTTTG CCATGGTTGG CGGCATACTT GCCCTGCTCA TTACCAAAGT AAACTTCAAC
ATCTCGGCAG GAATAGGGTT TATTGCATTG TTTGGTATCT GTGTTCAAAA TGGGGTAATC
CTGATTACAA GGTTCAAAAG CAATATGGCC GAGCTGAAGC ACCATCCGAC CTGGACCTTT
GCAGATGCCA TACGGGATGG TGTGGCCACA AGGTTAAGAC CGGTAATCAT GACGGCGATG
ATGGCTGCAA TAGGACTGAT GCCTGCTGCT TTATCAACAG GCATAGGTTC GGAAGCTTCC
AAACCACTGG CCATTGTGGT AATTGGTGGA CTGATCACCA ATACATTCTT CAATCTTTTT
GTATACCCAA TAGTTGTATA CTGGGCTTAT CACAAAAGAA TGGCCCATTT AAAACACTGA
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| Protein sequence | MNKFIKSIIN FALKNKYFIF FATFILVLAG YLSFKHTTIE AFPDVTNTNI TIITQWPGRS
AEEVEKFVSR PLEIAMNPTE KRTSIRSSSL FGLSVVKITF EDNVDYQFAR VQVNNHLDEA
DLPSGARPEV QPPYGPTGEI FRYTLKSDKQ SVRELKTLQD WVVQRELLSV PGIADVVSFG
GEVKTYQITV DPQKSLQYGV TATELFNAVS KSNINVGGDV IEQSGQAYVV RGIGVLNNID
EIKNIIVDNF HGTPVYVKTI AEVTEAALPR LGQVGRDRDP DVVEGIVVMR KGENPSEVIR
ALKEKIKDVN DNILPGDVKI SPFYDREDLV NFATHTVMHN MLEGIIFVTL IVFLFMADWR
TTLIVSVIIP LALLFAFICL KLKGMSANLL SMGAIDFGII IDGAVVMVEG IFVALDYSAH
KNGTEKFNRM SKLGIIKKAC LENGKGIFFA KLIIITGLMP IFTFEKVEGK MFSPLAWTLS
FALLGALLLT FTLVPAMASV LLNKNVKEKH NIFLEYLTRG VMKTYNRAFK ARKIVFISAL
VVLVIGFFSF RFLGTEFLPS LDEGSIYVRA SASLSVSLNE TKKLSNEMRK IFLSFEEVKQ
VMSQTGRPND GTDATGFYNM EFLVDIYPKS EWKRKESKEQ LVQRMQEKLK GYPGISLNFS
QPISDNVEEA VSGVKGSIVV KMFGNDFSFI EQQEEKIAHI LKTVPGIEDL GILRNLGQPE
LRINLDQSKM ALYGVTTEDA NSIIEMAIGG KAATQIYEGE RKFDLRIRYP EDFRNDEASI
AALRIPTLSG AKVPLSEIST IRKITGPSII YRDKHQRYGA IKFSIRGRDM GSTIAEAQRK
VAAEIKLPKE YKLEWAGDFE NQQRATARLS TAVPISLLLI FFILFVLFGN IKDALLVLNN
VPFAMVGGIL ALLITKVNFN ISAGIGFIAL FGICVQNGVI LITRFKSNMA ELKHHPTWTF
ADAIRDGVAT RLRPVIMTAM MAAIGLMPAA LSTGIGSEAS KPLAIVVIGG LITNTFFNLF
VYPIVVYWAY HKRMAHLKH
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