Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1340 |
Symbol | |
ID | 8252440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1595787 |
End bp | 1596536 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644934994 |
Product | phosphoesterase PA-phosphatase related |
Protein accession | YP_003091617 |
Protein GI | 255531245 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.130328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAGAT TGAAATGTCT CCTGTTACTG GGCCTGTGTT TTCCTTTATT AACCCTTGCC CGGCAAGCTG CCCCTATTGA TACAACAGCT AAAAAAACGA GCTTTAAAAT TGCCCCTTTT ATCATTCCGG CCATTTTTTT AGGCTATGGG GCAATGGGCG GCGGCCATAA TTTTGTTCAT GACCTGGATG TAACAACAAG GAACGAACTT CAGGAAGATC ATCCGCTGTT CTCTGTTCAT GCAGATGATT TTATGCAATA TGCACCGGCT GCGGCTGTTT ATGCCTTAAA TTTATCAGGA GTAAAGGGCA AACATAACCT GGTAGATGCA ACAGGCATTT ATGCCATTTC TTTTGGATTG ATGAAAGCTT CAACGCTTAT GGTGAAATCT GCTACAGGAC GCCTGCGTCC CGATGGAAGC ACTAACGATT CTTTTCCTTC GGGCCATACG GCAACTTCAT TTGCTGCAGC CGAATTTCTG AAACAGGAGT ATAAAGATGT TTCTCCCTGG ATCGGTTATG CCGGCTATGC TGTAGCTGGT ACAACCGGCA TTTTCCGGTT GTACAACAAC AGGCATTGGG TAAGCGATGT AGTGGCGGGT GCGGGCTTTG GTATCGTGTC AACCAAACTG AGCTACCTGG TATACCCTGC ACTGAAAAAA TTAATCAGTG GCAACAGATC AGCCAATTTT TCACTTGTAC CAACTTATCA GGACAAAGCG CCAGGTTTTT CATTTGCCAG CCGGTTTTAG
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Protein sequence | MIRLKCLLLL GLCFPLLTLA RQAAPIDTTA KKTSFKIAPF IIPAIFLGYG AMGGGHNFVH DLDVTTRNEL QEDHPLFSVH ADDFMQYAPA AAVYALNLSG VKGKHNLVDA TGIYAISFGL MKASTLMVKS ATGRLRPDGS TNDSFPSGHT ATSFAAAEFL KQEYKDVSPW IGYAGYAVAG TTGIFRLYNN RHWVSDVVAG AGFGIVSTKL SYLVYPALKK LISGNRSANF SLVPTYQDKA PGFSFASRF
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