Gene Phep_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1340 
Symbol 
ID8252440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1595787 
End bp1596536 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content45% 
IMG OID644934994 
Productphosphoesterase PA-phosphatase related 
Protein accessionYP_003091617 
Protein GI255531245 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.130328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGAT TGAAATGTCT CCTGTTACTG GGCCTGTGTT TTCCTTTATT AACCCTTGCC 
CGGCAAGCTG CCCCTATTGA TACAACAGCT AAAAAAACGA GCTTTAAAAT TGCCCCTTTT
ATCATTCCGG CCATTTTTTT AGGCTATGGG GCAATGGGCG GCGGCCATAA TTTTGTTCAT
GACCTGGATG TAACAACAAG GAACGAACTT CAGGAAGATC ATCCGCTGTT CTCTGTTCAT
GCAGATGATT TTATGCAATA TGCACCGGCT GCGGCTGTTT ATGCCTTAAA TTTATCAGGA
GTAAAGGGCA AACATAACCT GGTAGATGCA ACAGGCATTT ATGCCATTTC TTTTGGATTG
ATGAAAGCTT CAACGCTTAT GGTGAAATCT GCTACAGGAC GCCTGCGTCC CGATGGAAGC
ACTAACGATT CTTTTCCTTC GGGCCATACG GCAACTTCAT TTGCTGCAGC CGAATTTCTG
AAACAGGAGT ATAAAGATGT TTCTCCCTGG ATCGGTTATG CCGGCTATGC TGTAGCTGGT
ACAACCGGCA TTTTCCGGTT GTACAACAAC AGGCATTGGG TAAGCGATGT AGTGGCGGGT
GCGGGCTTTG GTATCGTGTC AACCAAACTG AGCTACCTGG TATACCCTGC ACTGAAAAAA
TTAATCAGTG GCAACAGATC AGCCAATTTT TCACTTGTAC CAACTTATCA GGACAAAGCG
CCAGGTTTTT CATTTGCCAG CCGGTTTTAG
 
Protein sequence
MIRLKCLLLL GLCFPLLTLA RQAAPIDTTA KKTSFKIAPF IIPAIFLGYG AMGGGHNFVH 
DLDVTTRNEL QEDHPLFSVH ADDFMQYAPA AAVYALNLSG VKGKHNLVDA TGIYAISFGL
MKASTLMVKS ATGRLRPDGS TNDSFPSGHT ATSFAAAEFL KQEYKDVSPW IGYAGYAVAG
TTGIFRLYNN RHWVSDVVAG AGFGIVSTKL SYLVYPALKK LISGNRSANF SLVPTYQDKA
PGFSFASRF