Gene Phep_1325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1325 
Symbol 
ID8252425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1578267 
End bp1578836 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content39% 
IMG OID644934979 
ProductRedoxin domain protein 
Protein accessionYP_003091602 
Protein GI255531230 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.855613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTTA GCTTTATATC TATTTTGCTG TATGTAGTGC CCGTAGCCTT GAAATTTGTA 
TCGGTTATAC TTTTTTTATT TCCTATAGCT TTGAAAGCGC AGCAAGACCA GGACACATTG
ACAAAAATTG GTGATCGGGT TCCGGAATTC TCTTTTGAGC TGGAGAAAGG TAAAATGGCA
AACATCAGTG ATTATAAAGG AAGGTTGATC TTGATTAATC TTTTTGCTAC CTGGTGTCCA
CCATGTAATA CAGAACTGCC ATTGGTGCAA AAACAGATAT GGGAGAAATA TAAAGACAAT
CCTAAATTTG TTTTTTTTGT TTTTGGCAGG GAAGAAGGCT GGGACATCCT GGTACCCTAT
AAACAAAAGA AAGGCTTTAC CTTCCCCATA CTTCCGGATA AAGACCGCGG GATATTTAAA
AAGTTTGCAA TACAGTCCAT TCCAAGGAAC ATCATTGTTG ATCAGGACGG CAAAATTATT
TACCAGTCTG TGGGTTATAC TGAAAAGGAA TTTGCAGAAA TGGTGACACT GATTGAGCGG
AACCTGAAAC AACAGGACCA GGGAAAATAG
 
Protein sequence
MKLSFISILL YVVPVALKFV SVILFLFPIA LKAQQDQDTL TKIGDRVPEF SFELEKGKMA 
NISDYKGRLI LINLFATWCP PCNTELPLVQ KQIWEKYKDN PKFVFFVFGR EEGWDILVPY
KQKKGFTFPI LPDKDRGIFK KFAIQSIPRN IIVDQDGKII YQSVGYTEKE FAEMVTLIER
NLKQQDQGK