Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1325 |
Symbol | |
ID | 8252425 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1578267 |
End bp | 1578836 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644934979 |
Product | Redoxin domain protein |
Protein accession | YP_003091602 |
Protein GI | 255531230 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1225] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.855613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTTA GCTTTATATC TATTTTGCTG TATGTAGTGC CCGTAGCCTT GAAATTTGTA TCGGTTATAC TTTTTTTATT TCCTATAGCT TTGAAAGCGC AGCAAGACCA GGACACATTG ACAAAAATTG GTGATCGGGT TCCGGAATTC TCTTTTGAGC TGGAGAAAGG TAAAATGGCA AACATCAGTG ATTATAAAGG AAGGTTGATC TTGATTAATC TTTTTGCTAC CTGGTGTCCA CCATGTAATA CAGAACTGCC ATTGGTGCAA AAACAGATAT GGGAGAAATA TAAAGACAAT CCTAAATTTG TTTTTTTTGT TTTTGGCAGG GAAGAAGGCT GGGACATCCT GGTACCCTAT AAACAAAAGA AAGGCTTTAC CTTCCCCATA CTTCCGGATA AAGACCGCGG GATATTTAAA AAGTTTGCAA TACAGTCCAT TCCAAGGAAC ATCATTGTTG ATCAGGACGG CAAAATTATT TACCAGTCTG TGGGTTATAC TGAAAAGGAA TTTGCAGAAA TGGTGACACT GATTGAGCGG AACCTGAAAC AACAGGACCA GGGAAAATAG
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Protein sequence | MKLSFISILL YVVPVALKFV SVILFLFPIA LKAQQDQDTL TKIGDRVPEF SFELEKGKMA NISDYKGRLI LINLFATWCP PCNTELPLVQ KQIWEKYKDN PKFVFFVFGR EEGWDILVPY KQKKGFTFPI LPDKDRGIFK KFAIQSIPRN IIVDQDGKII YQSVGYTEKE FAEMVTLIER NLKQQDQGK
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