Gene Phep_1322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1322 
Symbol 
ID8252422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1576634 
End bp1577347 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content47% 
IMG OID644934976 
Productcyclase/dehydrase 
Protein accessionYP_003091599 
Protein GI255531227 
COG category[S] Function unknown 
COG ID[COG5637] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAC ATCAGACTAA CCTAAAGCTG CGTTCGGGAA AATTTTCTAT TGAAAAACAT 
CATTACGAAA ACATTGGTTT AAACGAGCGC ATGGTTTCCA TGTTTTTAGG CGGTATACTT
GTCAGCCGAA ACATTACACG CCCCTTCAGG GCTCCTTTCC TTTATGGCGC TTACCTGGCC
TATCGTGCAT TTACGGGGCG CTGTCTGATC TATGAGCGGC TGGGCATTGA TGCGAGCAAG
CCTCACGCGG TAAACATAAG GGGTGAATTT GTGATCGACC GCCCCCCACA CGAGGTTTAT
ACCTATTGGC GCAACCTTAA AAACCTGCCA GAGAGTATCA AACACCTGCT AAATGTTGAA
ATGGTTGATG AAAACCTTTC CCGCTGGAAA TCGAATGTGA TGGGAAATGT ATTTGCGATC
GACTGGGAAG CAGAGATCGT TAAAGACGAA CCCGGCCGTC TGATCGGATG GCGGTCTGCA
CCAGGTACGA TGATCCACCA TGTAGGCAGG GTAGAATTCG GGGAAACAGC AGACCAGCTG
GGCACGACCT TAAAAGTTGT ACTCTCCTAC CATCCACCTG CAGGCGGCAT TGGTTTAGGC
CTGGCCAAAC TATTGAACCC TTATTTTGAA AGCCTGCTCA AAAAAGAGAT CAAAAGTTTC
AAACATGTTA TTGAACGTGA ACCTTATGCA GTAAACGGGC ATGCAAATTA TTAA
 
Protein sequence
MSIHQTNLKL RSGKFSIEKH HYENIGLNER MVSMFLGGIL VSRNITRPFR APFLYGAYLA 
YRAFTGRCLI YERLGIDASK PHAVNIRGEF VIDRPPHEVY TYWRNLKNLP ESIKHLLNVE
MVDENLSRWK SNVMGNVFAI DWEAEIVKDE PGRLIGWRSA PGTMIHHVGR VEFGETADQL
GTTLKVVLSY HPPAGGIGLG LAKLLNPYFE SLLKKEIKSF KHVIEREPYA VNGHANY