Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1322 |
Symbol | |
ID | 8252422 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1576634 |
End bp | 1577347 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934976 |
Product | cyclase/dehydrase |
Protein accession | YP_003091599 |
Protein GI | 255531227 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAC ATCAGACTAA CCTAAAGCTG CGTTCGGGAA AATTTTCTAT TGAAAAACAT CATTACGAAA ACATTGGTTT AAACGAGCGC ATGGTTTCCA TGTTTTTAGG CGGTATACTT GTCAGCCGAA ACATTACACG CCCCTTCAGG GCTCCTTTCC TTTATGGCGC TTACCTGGCC TATCGTGCAT TTACGGGGCG CTGTCTGATC TATGAGCGGC TGGGCATTGA TGCGAGCAAG CCTCACGCGG TAAACATAAG GGGTGAATTT GTGATCGACC GCCCCCCACA CGAGGTTTAT ACCTATTGGC GCAACCTTAA AAACCTGCCA GAGAGTATCA AACACCTGCT AAATGTTGAA ATGGTTGATG AAAACCTTTC CCGCTGGAAA TCGAATGTGA TGGGAAATGT ATTTGCGATC GACTGGGAAG CAGAGATCGT TAAAGACGAA CCCGGCCGTC TGATCGGATG GCGGTCTGCA CCAGGTACGA TGATCCACCA TGTAGGCAGG GTAGAATTCG GGGAAACAGC AGACCAGCTG GGCACGACCT TAAAAGTTGT ACTCTCCTAC CATCCACCTG CAGGCGGCAT TGGTTTAGGC CTGGCCAAAC TATTGAACCC TTATTTTGAA AGCCTGCTCA AAAAAGAGAT CAAAAGTTTC AAACATGTTA TTGAACGTGA ACCTTATGCA GTAAACGGGC ATGCAAATTA TTAA
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Protein sequence | MSIHQTNLKL RSGKFSIEKH HYENIGLNER MVSMFLGGIL VSRNITRPFR APFLYGAYLA YRAFTGRCLI YERLGIDASK PHAVNIRGEF VIDRPPHEVY TYWRNLKNLP ESIKHLLNVE MVDENLSRWK SNVMGNVFAI DWEAEIVKDE PGRLIGWRSA PGTMIHHVGR VEFGETADQL GTTLKVVLSY HPPAGGIGLG LAKLLNPYFE SLLKKEIKSF KHVIEREPYA VNGHANY
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