Gene Phep_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1315 
Symbol 
ID8252415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1563986 
End bp1565395 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content46% 
IMG OID644934969 
ProductSialate O-acetylesterase 
Protein accessionYP_003091592 
Protein GI255531220 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAA AAATCAGTTT GCCTTTCCTG TTTTTGTTAT GGCCTTATGC GCTTTTTGCA 
AAGGTAAAAT TACCAGCCTT ACTGAGCGAT CACGTGGTAT TGCAGCAACA GTCGGCGGTA
TTGTTATGGG GCAATACTAT TGCTGGCAGA CAGCTGAGTG TAACCACCAG CTGGGACAAT
AAAAGCTATA CAACAACCGC CGGCAGCAAG GGTGCTTTCG AATTAAGGGT ACAAACACCT
GCTGCGGGTG GGCCGTTCTA CATTTCTTTT AATGACGGGG AACTGGTAAA AATAAATGAT
GTGATGATCG GAGAGGTATG GATCTGCTCC GGGCAGTCAA ACATGAGTAT GACAATGCGC
GGCTTTCCTA AACAGCCTAT ATTAAATGCA GACGGGATTA TTGCTGCAGC CGGAAATGCA
CAGCTTAGGT TGTTTAAACT ACAGCGTGCA GCAAGTCTTG AGCCGCTTAA TGACGTGAAG
GGCAACTGGA ACACCGCATC ACCTGAAAGT GCAGCGGCCT TCAGTGCTAT GGCCTATCAG
TTTGGCGAAA TGCTGCAGCG CAGGTTAAAG GTGCCGGTAG GATTGATTTT AACCGCTGTG
GGGGGTACCC AGATCCAGGC CTGGATGAGC AGTGCCCAGC TGCAGCAATT TAAAGAAGTG
AACATCCCAT TAAGCCTGGA TACCGCTGCC GCGCCGCATA AAATGCCAAC AGCCTTGTAC
AATGGCATGG TAGCACCATT GTTAAAGTTT AAAATTAAGG GTGCTATATG GTGCCAGGGA
GAGGCTAACC GGGATGATCC TGCATTGTAC GGGCAACTTT TCCCTGCTAT GGTTGCTGGC
TGGCGGAAGG ATTGGAACAT TCCTGATTTC CCTTTTTATT ATGTGCAGAT AGCCCCTTTA
AACAGTCGCG ATAAACGCCC AACCATTGTA TTGGTCAGGG AAGCCCAACA AAAGGCTTTG
GATAAAATCC CAAATTCCGA CATGGTGTGT ACACTTGATG TGGGTATGGA AAAATTTATC
CATTATATGG ATAAAACGAC GCCGGCTATG CGCCTGGCCA ATTGTGCGCT GGCTAAAACT
TATGCATTTA AAGATATTCC CTGTGAAGGG CCGGTTTATC AGTCCATGAA AATTAAAGGC
GATCAGCTCA TGATTTCTTT TGCGCATACA GGCACTGGCC TGAAACTGTT AAATGATACC
TTAAAATCAT TTGAGGTTGC AGGTGAAGAC CAGGTGTTTT ATCCGGCCTG TTCCCGCATC
ACTTCAGCCA ATACCATTAC AGTAGGCACA ACTGAGGTTA AAAAGCCAGT GGTGTTGCGT
TATGCTTTTC ACAACTGGGC CATTGCCACA GTTTTTAATT CAGATGGCCT GCCGCTGCCT
TCATTCCGTA CCGATAACTG GTTAAAATAA
 
Protein sequence
MNLKISLPFL FLLWPYALFA KVKLPALLSD HVVLQQQSAV LLWGNTIAGR QLSVTTSWDN 
KSYTTTAGSK GAFELRVQTP AAGGPFYISF NDGELVKIND VMIGEVWICS GQSNMSMTMR
GFPKQPILNA DGIIAAAGNA QLRLFKLQRA ASLEPLNDVK GNWNTASPES AAAFSAMAYQ
FGEMLQRRLK VPVGLILTAV GGTQIQAWMS SAQLQQFKEV NIPLSLDTAA APHKMPTALY
NGMVAPLLKF KIKGAIWCQG EANRDDPALY GQLFPAMVAG WRKDWNIPDF PFYYVQIAPL
NSRDKRPTIV LVREAQQKAL DKIPNSDMVC TLDVGMEKFI HYMDKTTPAM RLANCALAKT
YAFKDIPCEG PVYQSMKIKG DQLMISFAHT GTGLKLLNDT LKSFEVAGED QVFYPACSRI
TSANTITVGT TEVKKPVVLR YAFHNWAIAT VFNSDGLPLP SFRTDNWLK