Gene Phep_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1308 
Symbol 
ID8252408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1556033 
End bp1556608 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content41% 
IMG OID644934962 
Productprotein of unknown function DUF892 
Protein accessionYP_003091585 
Protein GI255531213 
COG category[S] Function unknown 
COG ID[COG3685] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.758326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA CAAAAACCGG CGGCGCAAAG ACAGCTGCTA AAACCTCCAG CATTTCGATC 
AAGTCTAAAA CAGGAAAAAT GGAAGATTCT GAATTTCACG AATTCTTTGT AGATGAGCTG
AAAGACATTT ACTGGGCAGA AAAACATCTG GTAAAGGCTT TACCTAAAAT GAAAAAAGCA
GCAACAAGTC CAGAACTGGC AGCAGCTTTT GAAAAACACA CGGAAGAAAC CAACACCCAC
ATTGCCACTT TAGAACAAGT ATTCTCTTTA TTGGAAGAAA AGGTACAAGG CAAGAAATGT
GATGCGATGG AAGGTTTATT AAAAGAAGCC GACAGTATTA TTGAGGATAC CGATTCCGGC
ACTATGATTC GTGATGCAGG ACTGATACTG GCTGCACAAA AAGTGGAACA CTATGAAATT
GCTACTTATG GTACATTAGT TGTATTTGCA CAGAATATGG GCCATACCGA TGTAGCTGAA
CTGTTGCAAT TTACCCTCGA CAATGAAAAG GCAACCGATG TGGCTTTAAC CGAAATTGCA
GTAAGTTCCA TTAACGAACA GGCAGCTGCA GAATAA
 
Protein sequence
MATTKTGGAK TAAKTSSISI KSKTGKMEDS EFHEFFVDEL KDIYWAEKHL VKALPKMKKA 
ATSPELAAAF EKHTEETNTH IATLEQVFSL LEEKVQGKKC DAMEGLLKEA DSIIEDTDSG
TMIRDAGLIL AAQKVEHYEI ATYGTLVVFA QNMGHTDVAE LLQFTLDNEK ATDVALTEIA
VSSINEQAAA E