| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1297 |
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| Symbol | |
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| ID | 8252397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1539167 |
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| End bp | 1540738 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934951 |
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| Product | glycoside hydrolase family 39 |
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| Protein accession | YP_003091574 |
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| Protein GI | 255531202 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3664] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGCCC TGGTTTTAAA TCTATGCACC GTGTTGCTGG GGTTTTTCCT GTGTCTTTCT
GTTCAGCCGG TAAAGGCACA GGTTAAACGT CAGATCCATG CCGACCTGAA ATCGGTTGCC
GGAAATAAAA GCACAGTATT TAATGAATGT ATTGGTGCGG GAAGGGCAAA CGAGGGCCTG
CGGGCCGACT GGCAGCAGCA GCTAGCCATG ATCCAGAAAG ACGTACATTT TAAATACATC
CGTTTTCACG GCCTTTTGCA CGATGACATG CGGATTTATA GCCTGGATAA AACCGGTAAG
CCGGTTTATA ATTTTCAGTA TGTAGACCGG TTATACGATT TTTTACTGAG CATCAACATC
CGGCCTTTTG TCGAATTTGG CTTTATGCCG CCCGACATGG CATCGGGTAC CAAAACCATT
TTCTGGTGGA AAGCGAATGT GAGCAAACCC AAATCCTATA CACAATGGGA TACGCTGATT
ACCAAATTGG TGAAACATTG GCAGCAGCGT TATGGAGAAG AGGAAGTGAA AAAATGGTAT
TTTGAAGTAT GGAACGAGCC TGACCTCAAG GGATTTTTTG ATGGAACCCA GGCTGATTAT
TTCGAATTAT ATGCTCATAC CGTTAAAGCA GTTAAAAGTG TTTCCAGGGC TTACCGTGTG
GGTGGCCCTG CTACCTCGGC TACCAAGTGG ATCGCTGAGT TTTTATCCTA TTGTGAAAAC
AATAGATTAC CTGTCGATTT TGTGAGTACA CATGATTATG GTACAACTTC GGTACTGGAC
GAGATGGGAA CCAAAAAACA ACAACTGAAA AGCATCCGTG ACACCATTGC CATTGATGTA
AAGCGGGTAA GAGCCACCAT TAATACATCG GCCTATAAAA AAGCAGAGCT GCACTTTACA
GAATGGAACA CTTCTCCATC GTCCAGAGAC CCGATCCACG ATACTTATCA AAACGCGGCG
TATATTTTAC ACGTATTAAA AAAGGCTGCT GCCAATAGCA ATTCCATGTC GTACTGGACC
TTTACTGATA TTTTTGAGGA AGCAGGCCCG GGCCCTACAC CTTTTCATGG GGGGTTTGGA
CTGATCAATC TCCAGGATAT CAAAAAACCG GGATATCATG CTTATCATTT CATGAAGGAG
CTGGGTAATA CAGAGCTAAA AAATGAGGAT GAAAGCTCGT ATGTCTGTAA ATCTGAGCAA
GGGGTACAGG CATTGATCTG GAATTACACC CATCCCTTAA ATGGATACAG CTTTAACCAG
GATTACTTTA ATAAAGTACA GCCACCTGCA ACCAACCATG ATGTCCGGTT CAGTGTGGCC
AATCTGAGGA ATAGTACTTA CCTGCTGGAA GAGTACAGGG TAGGTTACGG GCAAAATGAT
CCCTACACTG CTTACCTGAA AATGGGAAAG CCAGAACAAT TAAGTAGGGC AGAAGTTAGC
CGGTTAAAGC AGGTGTCGTC CGGAGCTGCA TTCCGTAAAA GCACCATAAC AGTAAGCGGT
GGGAAATTTG AACAGCTTAT CCGGCTTTCT GACAATGAAA TCGTATTCCT GAAGCTGATC
AGACACCTTT AA
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| Protein sequence | MRALVLNLCT VLLGFFLCLS VQPVKAQVKR QIHADLKSVA GNKSTVFNEC IGAGRANEGL
RADWQQQLAM IQKDVHFKYI RFHGLLHDDM RIYSLDKTGK PVYNFQYVDR LYDFLLSINI
RPFVEFGFMP PDMASGTKTI FWWKANVSKP KSYTQWDTLI TKLVKHWQQR YGEEEVKKWY
FEVWNEPDLK GFFDGTQADY FELYAHTVKA VKSVSRAYRV GGPATSATKW IAEFLSYCEN
NRLPVDFVST HDYGTTSVLD EMGTKKQQLK SIRDTIAIDV KRVRATINTS AYKKAELHFT
EWNTSPSSRD PIHDTYQNAA YILHVLKKAA ANSNSMSYWT FTDIFEEAGP GPTPFHGGFG
LINLQDIKKP GYHAYHFMKE LGNTELKNED ESSYVCKSEQ GVQALIWNYT HPLNGYSFNQ
DYFNKVQPPA TNHDVRFSVA NLRNSTYLLE EYRVGYGQND PYTAYLKMGK PEQLSRAEVS
RLKQVSSGAA FRKSTITVSG GKFEQLIRLS DNEIVFLKLI RHL
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