| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1292 |
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| Symbol | |
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| ID | 8252392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1528099 |
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| End bp | 1530687 |
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| Gene Length | 2589 bp |
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| Protein Length | 862 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934946 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_003091569 |
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| Protein GI | 255531197 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.016367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCTGT TTTTATTGAG CAATGTATAT ACTTCTGCAT CCGGGCAGCA ACAGCCCAGG
TTACAATGGT CCATAAATGA CAGCTGGAAA TATTTATCCC AGGGGGCAGA TTTTGCACAG
CGACCAAAAG CTGATGATTC CAAATGGCAA TCGGTAAACA TTCCCCACAC CTGGAATGCA
AAAGATCCTT TTGACGATGA CGAGACTTCC AGGAGGGACA TTAGCTGGTA CCGGAAAAAG
GTAATGCTTG ACAAGCGGTT TCAGGGCAAA AAGATCTATC TGAATTTTGA AGGTGCCTAC
CAGGTGGCCG ATGTATATGT AAATGGGGTA TTTGCAGGGC AGCATAAAGG TGGTTATACC
GCTTTTACTT TCGATATTAC CCACTTGGTT AAGCTGGGCG ATACCCCAAC AGAAAACCTG
ATTGCTGTTC AGCTGAACAA TGCCCAGGAC AACTTTATAC CGCCGCTATC TATTGGTTAT
GCTTCTTATG GAGGTATTTA CCGTGATGCC TGGCTCATCA GTACCAATAA ACTTCATTTT
AAAATGTTGG ACCATGGTTC TCCAGGCGTA TTTATCAGCA CCCCGAAGGT AGACAGCAGC
CGTGCCTCGG TTAACATCAA AGGTATCGTA AGCAATGACG ACAGTATAGA ACGAAAGTTT
GAAATGCTGC ATGTTGTTTA TGATGCCCGG CAAAAAGAAG TAGCCAGAGT AAGTAAAAAT
TACACTGTTG CTCCTGGCAA AGAACTGGTT TTTGCACTAG ATGCCAGTGC ACTTAAAAAT
CCTGAGTTAT GGTCGCCCGA TAAGCCTTAT TTATATACTG TAAAAAGCCG GCTGATAGAA
AGTGGCCAGG TGATTGATGA ACTAAGCAAC CCGCTGGGTT TCCGCTGGTT TAGCTTTGAT
GCCAATAAGG GTTTTAGTTT AAACGGTAAA AAACTGGTCT TAAAAGGCAC CAACCGCCAT
CAGGACATGA AAGATCATGG TGATGCCCTA TCGGCCGAAG ACCATTACCG TGATTTAAAG
CTGATCAAAG ATATGGGCTG TAATTTTTTA AGACTGGCCC ATTATCCACA GGCACCTGAA
GTATTGAAAC TGGCCGATAA ACTGGGCATA CTGATATGGG AAGAGATTCC GCTGGTAAAT
TACATGAACC CGGTGCCCGA GTTCCTGAAA AACTCAAAAA CAATGATCAA AGAAATGATC
AGACAGAATT ATAACCATCC ATCTGTAATT ATATGGGGTT CCATGAATGA AGTGTTGTTG
TGGAGCGAGA AAGCGGAACG CATACAGGTA CAGGAAAATG CAGCTTATGT AAATAAGGTG
AAAATGTATG CGGTAAAGCT GGACAGCACA GTACGGGCAG AAGACCCATA CCGGTACAGT
ACTATGGCGA TGCATATGGG AGACGATTAT GATAAGTATG GGCTGTCGGA CATTCCGCAG
CTGGCCAGTT ATAATATCTA TAACGGTTGG TACAGCGGTA AATCGGAAGA ATTTAAACCT
ACGATAGATA ACAAGCACCG GCAAAACCCC AGGCAGGTTT TGTTTATCAG TGAATATGGT
GCGGAGGCAG ATAACCGGGT CAATACCGAA AAACCGCAAC GCTTTGATTT CACAGGACAG
TACCAGCGCT TGTACCATGA ATCTTATTTA AGCCAGATGA AGCAGATGCC TTACCTTGCC
GGAACAGCGA TATGGAACCA GTTCGATTTT TCACAGCCTA ACGTGGGTGG GGTAAGCAAC
AACATGAACC AGAAAGGAAT GGTAACCTGG GACAGAAAAC CTAAAGATTC CTATTATCTT
TATAAGGCCA ACTGGAATGC TGAACCGATG GTCTATATCG CCTCGCGCGA CTGGACGCAC
AGGGCAGGCC TGTCCGGAAG CACAGCTACC ATTGAAGTTT ATTCCAATCT GGACGAAGTT
AGCCTGATGG TGAACGGTGT ATCGTACGGA GCAAAGCAAC CAGATCACGT AAAAAAAATG
ATATGGAAAG TGAAGTTAAA TGAAGGTGTA AATGATATTG ATGCCAGGGG TAAATCGGCT
AAAGGCCTGG TGAACGATCA CCTTAACTTG AATTATGATG TTTACACGGA AAACCTTAAA
AATACTGCAC TGCCTTTCTC ACAACTGGCA GTAAATGTGG GTTCTAATGC CCAATATCTG
GACAATTCAG ATCATATCTG GCTGGAAGAC CGGCCTTATA AAACGGGTAG TTTTGGTTAT
ATTGGTGGAA GCCCTGCGAT GCTTAACATT AAAACGGTAA AGAAGAATAC CAACGACAGT
CCGCTTTTCT ATACTTACCA GGATGACATC AAGGGCTATC GTTTTGATGT GCCTGACGGA
AGGTATGAAC TGGAGATGTG TTTTATTGAA AGCGACAAGA TCCCGGCAAA TGAACGGATT
TTTGAAGTAT CTGTAAATGG GGATAAGCTG ATCGAAAACC TGGACCTAAC GGCCCAATAT
GGTTTTGGTG TTGCCGTAAG GAAAAAATAC AGGATCAGTG TAAGCAATGG CACAGGCTTA
CAGGTGATCT TTAAGGCCAT AAAAGGCAAA GCTGTTTTAA GCGGGATTAA ATTAAAGGCC
GCATTGTAA
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| Protein sequence | MYLFLLSNVY TSASGQQQPR LQWSINDSWK YLSQGADFAQ RPKADDSKWQ SVNIPHTWNA
KDPFDDDETS RRDISWYRKK VMLDKRFQGK KIYLNFEGAY QVADVYVNGV FAGQHKGGYT
AFTFDITHLV KLGDTPTENL IAVQLNNAQD NFIPPLSIGY ASYGGIYRDA WLISTNKLHF
KMLDHGSPGV FISTPKVDSS RASVNIKGIV SNDDSIERKF EMLHVVYDAR QKEVARVSKN
YTVAPGKELV FALDASALKN PELWSPDKPY LYTVKSRLIE SGQVIDELSN PLGFRWFSFD
ANKGFSLNGK KLVLKGTNRH QDMKDHGDAL SAEDHYRDLK LIKDMGCNFL RLAHYPQAPE
VLKLADKLGI LIWEEIPLVN YMNPVPEFLK NSKTMIKEMI RQNYNHPSVI IWGSMNEVLL
WSEKAERIQV QENAAYVNKV KMYAVKLDST VRAEDPYRYS TMAMHMGDDY DKYGLSDIPQ
LASYNIYNGW YSGKSEEFKP TIDNKHRQNP RQVLFISEYG AEADNRVNTE KPQRFDFTGQ
YQRLYHESYL SQMKQMPYLA GTAIWNQFDF SQPNVGGVSN NMNQKGMVTW DRKPKDSYYL
YKANWNAEPM VYIASRDWTH RAGLSGSTAT IEVYSNLDEV SLMVNGVSYG AKQPDHVKKM
IWKVKLNEGV NDIDARGKSA KGLVNDHLNL NYDVYTENLK NTALPFSQLA VNVGSNAQYL
DNSDHIWLED RPYKTGSFGY IGGSPAMLNI KTVKKNTNDS PLFYTYQDDI KGYRFDVPDG
RYELEMCFIE SDKIPANERI FEVSVNGDKL IENLDLTAQY GFGVAVRKKY RISVSNGTGL
QVIFKAIKGK AVLSGIKLKA AL
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