| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1289 |
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| Symbol | |
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| ID | 8252389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1524437 |
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| End bp | 1525555 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934943 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003091566 |
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| Protein GI | 255531194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CAAAGGGTAT TTTTCTGTTG ATTTTAAATT TGGTGCTGAG TTTTGGTTTT
TACAAATGCT ATGGACAAAG CAGTCGGCCC GCCATAATGG AGACCATGAA AAAAGTAGCC
AGATGGCAGG TAGACAGCAT TAAACAGCAT GGCTGGCGAC ATGCAGAAGA CGACTGGACC
AATGGTACCC TTTACACCGG CCTGATGGCG TACGCCCAGG CATCTGGCAA CCGTTCCTAT
ATTGATTTTT TGCGTAAGGA GGTTGGCGAA AAACTAAACT GGCAGATCAC CAAAGACTCT
TTGCGTTATT TCGCCGATTT CTATTGTGTA GGCCAGCTGT ACACTGAGCT TTACCTTCTG
GAAAAACAGC CCCGGACGAT CAAAGATTTT CGGCAACTGG CCGACACCCT GCTGGCACGG
CCGCATACAG AATCGCTGGA ATGGATCAAT AAAATCAACA GAAGGGAATG GGCCTGGTGT
GATGCCCTGT TTATGGGCCC GCCTGCCCTT GCCCTTCTGG CCAAAGCTAC CGGCAATACC
CAATACCTTG ACCTGAGCAA TAAACTCTGG TGGAAAACGA CAGCTTATCT TTATGATAAG
GAAGAACATT TATTTTATCG CGACAGCAGG TTTTTTGACA GAAAAGAAGC CAATGGTAAA
AAGGTATTCT GGGCACGCGG CAATGGCTGG GTAATGGGCG GTATGGCAAG GCTGCTGGAC
AATATGCCGG CAAATTATCC CGACCGGCCG AAATATATAC AGCTCTTTAA AGAAATGGCC
GGTAAAATAA AAACATTGCA GCAAGCCGAT GGAAGCTGGC GCACCAGTTT GCTCGATCCG
GAATCGTACC CTTCAAAAGA GACCAGCGGC ACTGCGTTTT ACTGTTATGC TTTGGCATGG
GGCATCAACC ATAAAATACT GGATGCCAAA ACCTATCTGC CCGTAGTAAG GAAAGCATGG
CATGCACTTA CCACCAGCAT AACAGCTACA GGTATGCTGG GCAATGTACA GCCCATTGGC
AATAAGGCAA AGGCCGAAAT CAAAGCCGAT GATACCGAGG TGTATGCCAT TGGTGGATTT
TTACTGGCGG GAACGGAGCT AATGAAATTA ACCAATTAA
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| Protein sequence | MMKTKGIFLL ILNLVLSFGF YKCYGQSSRP AIMETMKKVA RWQVDSIKQH GWRHAEDDWT
NGTLYTGLMA YAQASGNRSY IDFLRKEVGE KLNWQITKDS LRYFADFYCV GQLYTELYLL
EKQPRTIKDF RQLADTLLAR PHTESLEWIN KINRREWAWC DALFMGPPAL ALLAKATGNT
QYLDLSNKLW WKTTAYLYDK EEHLFYRDSR FFDRKEANGK KVFWARGNGW VMGGMARLLD
NMPANYPDRP KYIQLFKEMA GKIKTLQQAD GSWRTSLLDP ESYPSKETSG TAFYCYALAW
GINHKILDAK TYLPVVRKAW HALTTSITAT GMLGNVQPIG NKAKAEIKAD DTEVYAIGGF
LLAGTELMKL TN
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