| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1271 |
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| Symbol | |
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| ID | 8252370 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1502910 |
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| End bp | 1505237 |
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| Gene Length | 2328 bp |
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| Protein Length | 775 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934925 |
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| Product | Patatin |
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| Protein accession | YP_003091549 |
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| Protein GI | 255531177 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.190834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAA AGAAACTACT TGTATTTACC CTTGCTGTTT TGACATTTCC CGTATATGCT
CAAAAAGTAG GTTTGGTATT AAGTGGCGGC GGCGCAAAAG GAATAGCGCA TATTGGCACC
CTAAAAGCAC TGGAAGAAAA TAACATTCCG ATAGATTACA TCACCGGAAC TTCTATGGGT
GGCATAGTGG GGGCTATGTA CGCTGCCGGC TATACCCCTG GCCAGATTGA AAAAATTGCT
TTAAGTCCGG ACTTTCAAGA CTGGGTAAGT GGCCGCTTTA AAAGCGACTA TACTTTTTTC
TTTCAAAAGA AACCACTAAA CCCCTCTATT GTTACGGCCA AGCTATCCCT GGATACCAGC
TTAAGGATGA CATTCAGGTC TAACCTGGTG AACGATATTC CACTGAATTT TGCGCTGCTT
GAGCTTTTTT CGCAGGCTTC GGCGATATCT AAAGACAATT TCGACAACCT GTTTGTTCCA
TATCGTTGTA TGGTTTCTGA TGTTTTATCG CAAACCAGCA TTACAGTAAA AAAAGGGAAC
CTGGCCGAGG CAGTCAGGGC AACCATGACT GTTCCACTAA TCTACCGCCC CATAAAACTC
GAGGGGAAAT ATGTTTTCGA CGGAGGTTTA TACAACAACT TTCCGGCTGA TGTAATGAAA
AAGGAATTTA ACCCCGAAGT CATGATCGGT GCCAATGTTT CTTCCAAAAC TTATAACGAA
TATCCTAAAA ACCGGGATGA GCGACTGGTA AACAGGCTAA TGGTATTTAT GTTCCTTTCC
AAATCTGACT CTACCCTGAT TGGCGATAAC GGCGTTTATA TACAACCCGA CCTTAAAGAT
TACAATGTGA CTAATTTTAA CCCTGTCCAG GCCCTGATCA AACAAGGTTA TGATGCAACG
ATGGCCAATA TGGATGAAAT TAAAAAAAAG ATAAAAAGAC GGGTAAACAT CAATGATCTG
ATGACCAGGC GCAACGATTT CAACAATAGA AAACCTGATC TGGTTTTCAG CAATGTAACA
GTATCAGGCG TCAACGACCA GCAAAAGAAA TACGTTGAAC GGCTCTTTAA AAGAGACAAC
AAACCCACAT TTAATATTAA TGACATCAAA CAAGGGTATT ATAAGCTGGT AGCCGATGAG
ACATTTGAAA CCATTTATCC CCGGATATCC TATAATCCGG TATCAGATAA CTACAACCTC
GAAATCATTG CCCAGCCCAG GAAAAGCCTG AAAATTGATT TCGGCGGAAA TATTTCCAGC
CGACCTATCA GCAATGTATT TTTAGGTTTA CAGTACAATT ATCTGGCACG AAAAGCCTAT
ACTTTTGGCC TAAACCTCTA TTCAGGTCGA TTCTATGAAT CTTTACAGAT GAATGGCCGA
ATAGATTACC CTTCCGGCCT TCCCCTATTC CTGGCAGCAG ATGTAACTTA TAACCACTTT
GATTATTACA AAACAAGCTC CATTTTTATA GAAAACCCAC GCCCAACCTA TATTGAGCAG
TCGGATAGAA AAATAGAGTT AAAAATGGGC ATGCCCCTAA ACAGAAATGC CAAAATCACA
CTTAGCACGG CCTTCATTAA CAATAACGAC CGCTATAGCC CTAACAATAC TTTTTCCATT
GGCGATATAC TGGAGAAAAC AGTGTTAAAC GGCGCTATGT CTACCCTTGC CTTCGAACAA
TATACCTTTA ACCGTAAACA ATATGCAAAT AAAGGACGCA ATTTCCTGCT CAGCTTTAAT
TATTTTGCCG GAAGAGAAAG TTATACACCA GGCAACATTA ACGGCACCAG TTTACCCCTG
CTGGCTAATA CTAAAGTCAG TGTAAATAAA CAGTTCCGGC AATGGATAAA AATTAAAATG
AGCGAGGAAA ACTATTTTTT GCACCTGAAC AAATATACCA TGGGTTACCT GGCAGAAGCA
GTGTACTCCA ATCAACCGTT ATTCTCCAAC TATTATTCAA CCCTGTTGGC TGCCCCGGCA
TTTTATCCCT TACAGGACAG CAGGTCCGTA TTTCTGGAAA ATTTTAGGGC AACTACCTAT
CTCGCAGGAG GCATTAAAAA TGTATACAGC TTAAAAAGAA GTCTGGATAT TCGGATAGAA
GGCTATGTAT TCTTACCTTA CCGGGAATTT GAAAAAGTAG GTTTTCAGGG TATTACGCAT
AAAACCGCCT TTACCAAATG GCATTATGCC GGAACAGCCG GACTGGTTTA CCATACTCCC
CTGGGCCCCA TTGGCCTGAG TTATAATTTA TACGATGACC CCATAAAAAG AAACGGTGTT
TTGTTACATT TGGGGTACTT AATTTACAAT AAACGATCTA CAGAATGA
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| Protein sequence | MFLKKLLVFT LAVLTFPVYA QKVGLVLSGG GAKGIAHIGT LKALEENNIP IDYITGTSMG
GIVGAMYAAG YTPGQIEKIA LSPDFQDWVS GRFKSDYTFF FQKKPLNPSI VTAKLSLDTS
LRMTFRSNLV NDIPLNFALL ELFSQASAIS KDNFDNLFVP YRCMVSDVLS QTSITVKKGN
LAEAVRATMT VPLIYRPIKL EGKYVFDGGL YNNFPADVMK KEFNPEVMIG ANVSSKTYNE
YPKNRDERLV NRLMVFMFLS KSDSTLIGDN GVYIQPDLKD YNVTNFNPVQ ALIKQGYDAT
MANMDEIKKK IKRRVNINDL MTRRNDFNNR KPDLVFSNVT VSGVNDQQKK YVERLFKRDN
KPTFNINDIK QGYYKLVADE TFETIYPRIS YNPVSDNYNL EIIAQPRKSL KIDFGGNISS
RPISNVFLGL QYNYLARKAY TFGLNLYSGR FYESLQMNGR IDYPSGLPLF LAADVTYNHF
DYYKTSSIFI ENPRPTYIEQ SDRKIELKMG MPLNRNAKIT LSTAFINNND RYSPNNTFSI
GDILEKTVLN GAMSTLAFEQ YTFNRKQYAN KGRNFLLSFN YFAGRESYTP GNINGTSLPL
LANTKVSVNK QFRQWIKIKM SEENYFLHLN KYTMGYLAEA VYSNQPLFSN YYSTLLAAPA
FYPLQDSRSV FLENFRATTY LAGGIKNVYS LKRSLDIRIE GYVFLPYREF EKVGFQGITH
KTAFTKWHYA GTAGLVYHTP LGPIGLSYNL YDDPIKRNGV LLHLGYLIYN KRSTE
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