| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1266 |
|---|
| Symbol | |
|---|
| ID | 8252364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1497834 |
|---|
| End bp | 1498868 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644934919 |
|---|
| Product | dihydroorotate dehydrogenase 2 |
|---|
| Protein accession | YP_003091544 |
|---|
| Protein GI | 255531172 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0167] Dihydroorotate dehydrogenase |
|---|
| TIGRFAM ID | [TIGR01036] dihydroorotate dehydrogenase, subfamily 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.568421 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATCAGC TCATTAAACC TATATTTTTC CGGTTCGATC CTGAAAAAGT GCATTATTTT
GTTGTGAAAA GATTAAAATG GTTTCATGAT CATTTTCCGC TGGGGAAGAC AATTTTGCGT
AGCAGCTTTG ATGTTAACAT TAAAGGACTG GAACGGGAGG TTTTTGGCAT TAAATTCAAA
AATCCAGTAG GTCTGGCTGC GGGCTTCGAC AAAAACGGGG AATATATTGA AGCTTTGAGT
GACCTGGGCT TTGGTTTTAT AGAGGTAGGT ACGGTAACGC CTTTACCTCA ACCGGGGAAC
GATAAACCAA GAATGTTTCG TCTGGAAGAA GATAGTGCGC TGATCAACAG GATGGGATTT
AACAACAAAG GGGTGGATAC ACTTGCTGAA AGGTTAAGGT TGCTGAGAGG TAAACATAAA
GATATTGTTG TTGGTGGTAA CATTGGAAAA AATAAGAATA CCCCCAACGA GGATGCTGTT
AGTGATTATG TCAAATGTTT TGACCGTTTG TTTGATGTAG TTGATTATTT TGTAGTGAAT
GTAAGTTCGC CCAATACGCC TGGTTTAAGA GCATTGCAGG AGAAGGAACC ACTAATGAAC
CTGTTAAATA CCCTGCAGCA GCGAAATCAG AAGGATGGCA TTTCCAGGCC GATCTTATTG
AAAATTGCAC CTGATCTGAC CAATGAGCAG CTGGATGATA TTGTAGAGAT TGTAATGCAT
ACAGGGATTG CAGGAGTTAT TGCTACCAAC ACTACCATAG ACAGGAACGG TTTATATACT
GCTGAAAAAG TAACAAATGA AGCCGGCGGC TTAAGTGGTA AACCTTTGAC AATACGTTCT
ACCGAGGTGA TTAAATATCT GTCGGACAAA TCAAATAAAG CTTTTCCGAT TATAGGTGTA
GGTGGGATTC ATTCCCCACA GGATGCCAAA GATAAATTGG AGGCAGGCGC ATCTTTGGTA
CAATTGTATA CTGGTTTTAT TTACGAAGGT CCTGCAATCG TTAAACGAAT CTGTAAAGAG
TTGCTGGTAA AGTAA
|
|---|
| Protein sequence | MYQLIKPIFF RFDPEKVHYF VVKRLKWFHD HFPLGKTILR SSFDVNIKGL EREVFGIKFK
NPVGLAAGFD KNGEYIEALS DLGFGFIEVG TVTPLPQPGN DKPRMFRLEE DSALINRMGF
NNKGVDTLAE RLRLLRGKHK DIVVGGNIGK NKNTPNEDAV SDYVKCFDRL FDVVDYFVVN
VSSPNTPGLR ALQEKEPLMN LLNTLQQRNQ KDGISRPILL KIAPDLTNEQ LDDIVEIVMH
TGIAGVIATN TTIDRNGLYT AEKVTNEAGG LSGKPLTIRS TEVIKYLSDK SNKAFPIIGV
GGIHSPQDAK DKLEAGASLV QLYTGFIYEG PAIVKRICKE LLVK
|
|---|
| |