| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1263 |
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| Symbol | |
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| ID | 8252361 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1493074 |
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| End bp | 1494573 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644934916 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003091541 |
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| Protein GI | 255531169 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.796062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATTC ATTATATGGA TAATCAAACG CTGTTGCAGT ATTTTCACTG GTATTATAAT
GAAAATGAAA AATTATGGGT AAAGGCTATG AAAGATGCTG TTACATTAGC TGGTGCTGGT
ATAACCGGTG TTTGGTTGCC ACCGGCTTAT AAAGCAAATT CGGGCGGACA ATCAGTTGGG
TATGATCCTT ATGATCTTTT TGATCTGGGG GAGTTTGACC AGAAAAATAC GTTGGAAACC
CGTTACGGAA GCAAAATGGA ATATCAGCAG GCAATAAAGG CATTTCAGGA GCATGGCATT
GCGGTAATTG CCGATGTGGT GTTTAATCAT AAAGCCGGTG GTGATGAACT TGAAAAAATA
ATGGTAAGGA CAGTAGACCC TGATAACAGA CTGGAATTTA CTTCTGATAT ATTTGAAATT
GAGGCCTGGA CTAAATTTAC ATTTCCGGGC AGAAATGGGC AGTATTCGGA ATTTATATGG
GATAAAAACT GTTTTAGTGG AATAGATTGG GCAGAAAACC TGAAAGAAAC AGGGATTTAC
TCTATTCAAA ATGAATATGG GGAAGGTTGG GAAGAGGTGC CCTCAACCGA ACTGGGTAAT
TATGATTATC TGATGTATAA CGATATTGAA TTTAGAAATC CGGCTGTAAG AGCAGAATTG
AAGTATTGGG GGGAATGGTA TATTAAAAAT TGTGGCATGA ACGGTTTCCG GCTGGATGCC
GTAAAACACA TTTCGACGGA TTTTTTAACA GAATGGCTGG ATCATATAAG AGATACCTTT
AGCCGGGATT TCTTTATCGT AGCCGAAAAC TGGAACATTG AAGATCCTGC AGCCTTAACG
CACTATCTGG AAATTACTGA GGGGAGGATG CAGCTGTTTG ATCCTATGTT GCACCACAAT
TTTTATCTGG CTTCTACAAC AGAAAATTAC GATCTGACCA GGATATTTGA CCATACATTG
GTTCAATCCC ATCCCGAATT TGCTGTTACA TTTGTGGACA ATCATGATTC TCAGCCCTTA
CAGGCCCTTG AATCTTATGT CGATTTCTGG TTCAGGCCCC TGGCTTATGC CTTAATATTG
CTAAGGGAAC AAGGCATACC CTGTGTATTT TACCCAGATT TGTATGGTGC AAAATATACC
GATAAAACAG AAGAAGGTTA TGATGCAGGT GTTGAACTGG TTGCGTTGGC TGCATTGCCA
GATATGTTAC GCATCCGTAA GGACCTGGCT TATGGAGAAC AGCATGATTA CATGGATTTT
CCTAGCTGTA TTGGCTGGAC TAGGGAAGGA GTACCTGAAA AAGAAAATTC GGGAATAGCT
GTATTGATGA GCAACGGAGA TACAGGACTG AAACTGATGG AAATTGGCAA AGTACACACA
GGAAGAGTAA TGGTTGACGC ACTGGGTATT AGGGCAGAAG AAGTATTGAT TGATGAAAAT
GGTTGCGGGG AATTTTATTG TGATGCAGGC AGTGTTTCTA TATGGGTTTT ATCTTCTTAA
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| Protein sequence | MYIHYMDNQT LLQYFHWYYN ENEKLWVKAM KDAVTLAGAG ITGVWLPPAY KANSGGQSVG
YDPYDLFDLG EFDQKNTLET RYGSKMEYQQ AIKAFQEHGI AVIADVVFNH KAGGDELEKI
MVRTVDPDNR LEFTSDIFEI EAWTKFTFPG RNGQYSEFIW DKNCFSGIDW AENLKETGIY
SIQNEYGEGW EEVPSTELGN YDYLMYNDIE FRNPAVRAEL KYWGEWYIKN CGMNGFRLDA
VKHISTDFLT EWLDHIRDTF SRDFFIVAEN WNIEDPAALT HYLEITEGRM QLFDPMLHHN
FYLASTTENY DLTRIFDHTL VQSHPEFAVT FVDNHDSQPL QALESYVDFW FRPLAYALIL
LREQGIPCVF YPDLYGAKYT DKTEEGYDAG VELVALAALP DMLRIRKDLA YGEQHDYMDF
PSCIGWTREG VPEKENSGIA VLMSNGDTGL KLMEIGKVHT GRVMVDALGI RAEEVLIDEN
GCGEFYCDAG SVSIWVLSS
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