Gene Phep_1255 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1255 
Symbol 
ID8252353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1480942 
End bp1482315 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content39% 
IMG OID644934908 
Producthypothetical protein 
Protein accessionYP_003091533 
Protein GI255531161 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.201355 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.182611 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAAAA TCCTGCTGCT ATCTCTCCTA TTGGTTAAAA CCAGTTTCTC ATTCGCCCAG 
ATCAAATACC AGAAAGATTT TAACAGCGCG CAAAAGAAAG CTGCCGAAAC CAACAAACCT
TTATTCTTAA ATATAGGAGC CACCACCAAG GTACCGGGTA AAAGTGCAAT TGATAATCCC
GATGTAATTG AGTTTTACAA TAACAATTTT GTGAGTTATA TGGTTAGCCT GCCCAATACA
GAAGCAGTAG CTTTCATGAA AAAATACCAG CTTAAAATGT TCCCTGCTTA TATTTTCCTT
GATCAGAAGG GACAGTTAAT TGCCAAAGGT GCCAAAAGCA GCAACGCATC AAAACATTAT
TTAGAACTCG CAAATCAGGC ATTAACCAGA CTTTCAAGTG GTTCTTCCCT GGCCGATTAT
GAAGAGAAAT ACAAAAATGG AAACCGGAAT AAAGATTTTT TAAAAGAATA CATCAGTGCA
AAACAGCAAC TTGGCCTGTT CGATAATGCT AAATTAATTG ATGAATATGT TGAATATTTA
ACTGTAGGTT CTTTTAACGA TTATAATGAG GTACTGTTTG TTTTAAAAGC AGGACCATTT
GCCTATGGCA AAGCATACCG GCTGGCGTAT ACCAACCGCA AGATCGTAGA TAGCATTTAT
AAGACGCTTC CTTTAAGGGA ACGGGTTGAC CTGAACACCA GGATCATCAA CAATACCCAA
AACGAAGCAA TTGCTACCAA AAATTTAACG CTGGCCAACT CATTGTCCAA TTTTGTACGT
GGCGCCTATT CAAAAAATTA TGCAGCAGCA AATAAGCAGT CCGCCTACAT TCTGCTCAAT
TATTACAAAG CTGTAAAAGA CACCAACAAT TATTATCGCC AGGCCCAGTA TTACTACGAT
CAGTATTATA TGAGGATTAC TGCCGATTCC ATCAACAACC TGACAAAAAG ATTAAAAGGC
AAAAGAGATA GTCTGATGGC CTCATTTAAA GAACGTAAAA TAATTGCCGA TAAGCAGGCC
CCTCAAACAG AAAGCACTAC TTACACCTAT ACGTCAGTAG GTAGCAGTCC TGATCCGGCA
AAAAGCTTAG CAATGATCCT GAATAATGCG GCATGGGATT TTTATATTTT AGGTACCGGT
AAAACAGATT ATTTAAGCAA GGCATTACTT TGGAGTAAAC GCGCTATTGA ATTGGTACCG
GCAGCAGAGT ACTACGATAC CATGGCCCAT ATATTTTACC GCATGCAGCT CTATGATGAG
GCCTTGATTA ACCAGCACAA GGCAATTGAG ATTGCGGCTA AACAAAAAAA TGCAAAAGAA
AGGCTTGCAA GGCTCCGGGC AGCAGCAGAA AAAATGAAGC AAAGGCAGCT ATAA
 
Protein sequence
MHKILLLSLL LVKTSFSFAQ IKYQKDFNSA QKKAAETNKP LFLNIGATTK VPGKSAIDNP 
DVIEFYNNNF VSYMVSLPNT EAVAFMKKYQ LKMFPAYIFL DQKGQLIAKG AKSSNASKHY
LELANQALTR LSSGSSLADY EEKYKNGNRN KDFLKEYISA KQQLGLFDNA KLIDEYVEYL
TVGSFNDYNE VLFVLKAGPF AYGKAYRLAY TNRKIVDSIY KTLPLRERVD LNTRIINNTQ
NEAIATKNLT LANSLSNFVR GAYSKNYAAA NKQSAYILLN YYKAVKDTNN YYRQAQYYYD
QYYMRITADS INNLTKRLKG KRDSLMASFK ERKIIADKQA PQTESTTYTY TSVGSSPDPA
KSLAMILNNA AWDFYILGTG KTDYLSKALL WSKRAIELVP AAEYYDTMAH IFYRMQLYDE
ALINQHKAIE IAAKQKNAKE RLARLRAAAE KMKQRQL