| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1254 |
|---|
| Symbol | |
|---|
| ID | 8252352 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1478848 |
|---|
| End bp | 1480902 |
|---|
| Gene Length | 2055 bp |
|---|
| Protein Length | 684 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644934907 |
|---|
| Product | protein of unknown function DUF1680 |
|---|
| Protein accession | YP_003091532 |
|---|
| Protein GI | 255531160 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3533] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.831647 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.201869 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA GAAATAAACT GTTTTTGACC ATAGCATCCG TAGTACTTAA CATTGGATTT
GCCAAAGCCA TGGATAAGGC TGTCCAACCG ATTCAAAAGC CTTCAAAAGC AAATATTTCC
AAGCCACATT ATCAGCCAGT TTCTTTAGGT GATATTAAGC CTAAAGGCTG GCTTTTAGAA
CAGCTAAGGG TAATGAAGAA CGGCTCTACC GGCCAGATGG ATAAAATTTA TGATAAAATA
AAAAATGATA ATGGCTGGTT GGGCGGCAAA GGGGACAATT GGGAAGAAAC ACCCTATTGG
CTGGATGGTG CAGTTCCATT GGCCTACCAG TTGAATGATA CAGAACTAAA AGCTATCGTA
CTCAAATATA TCAATTGGTC CATACATAAT CAGCGTCCAT CTGGCTATTT TGGCCCGATC
ACCAAATGGG AAAGAAAAAC AGGAAAGCAG ATTGACCTTG CCAATTGCGA ACAGGCAGAA
GACTGGTGGC CTAAAATGAT TATGTTAAAA GTGATACAGC AATATTATTC TGCTACACAG
GATGAAAGCG TAATCCCTTT CATGACCAAA TATTTCAACT ATCAAAAAGA GGCATTAAAA
AAATGCCCTA TTGGAAAATG GAGTGAATGG TCACAATCTC GCGGAACAGA TAACGTAATG
ATGGTACAAT GGCTTTATGG CCATACAAAA GATGAGTCCT TATTGGAGCT GGCCGGCCTT
ATCAATTCTC AGTCTTTTGC CTGGAGCCAA TGGTTTGGTG GCAGAGATTG GGTAATCAAC
GCTGCCGCCC GCCCTAATGG AAAGAAATGG ATGAGCAGGC ATGGTGTAAA CGTTGCTATG
GGTTTAAAAG ATCCGGCTAT TAATTTTCAG CGAACGGGTG ACAGCACTTA CCTAAAAAGT
TTAAAAACTG TTTTTAATGA TTTGATGACT CTGCATGGCC TGCCCAACGG CATTTTTTCG
GCCGATGAAG ATTTACATGG CAACCAGCCA ACACAAGGCA CTGAGCTTTG TGCTACGGTA
GAGGCGATGT ATTCATTAGA AGAAATTATA AACATTACCG GAGATACACA TTACATAGAT
GCATTGGAAA GAATGACTTT TAATGCCATG CCTTCGCAAA CAACCGATGA TTATCATGAA
AAACAATATT TTCAGATGGC CAACCAAATA GAAATCAGTC GTGGTGTTTT TGCATTTACT
TTGCCTTTTG ACAGGAAAAT GAATTGCGTT TTAGGCGCAA AAAGCGGATA CACCTGTTGT
TATGTAAACA TGCATCAGGG CTGGACAAAG TTTAGCCAAA ATTTATGGCA TAAAACCGAA
AATGGTTTAG CTGCTTTAAT TTACGGCCCC AATACCTTAA GTACAAAAGT TGGTGCTCAA
CAAACCGATG TAACAATTGA AGAAGTAACA AACTATCCTT TTGAAGATCA GATCAATTTC
AATTTATCAT TAAAAAAAGC AGTAGCTTTT CCTTTCCAGC TACGCATTCC GACCTGGTGT
AAAGAAGCGG TGATTTTGAT CAACGGTAAA ATATACAGTA AAGAAAAGGG CGGAAAGATT
ATTACCGTAA ACAGAACCTG GCAAAATAAA GACCGGCTGA CTTTGCAATT GCCAATGGAA
ATCGCTGTTT CTGAATGGGC AGATAATTCA AGAGCGGTAG AACGTGGTCC ATTGGTTTAC
GGTTTAAAAG TTCAGGAAAA GTGGACTGAA GGAACGGATG AAAAAGAGGG AAAATATTTC
GAAGTTCATC CGGCATCGGC CTGGAATTAC GGCCTTTTAG AGGCAGTAAG TAAAAATCCT
GTTAAAGAAA CAACAATAAC GGTTAAAGCG CTTAAAAAAG ATTTTAGGTG GAATTTAGAA
AATTCTCCCA TAGAAATTAT AGTAAAAGCG AAAAAAATAC CGGGATGGAA ATCACAGAAT
GGTTTGGCCT ATCTTCCGGT TACTGGTCGG GAGGGGTTTT ACAAAGGAGC AGTAGACAGC
GATATAGAAA ATGTTGCTTT AGTTCCTGTC GGCTTTACTA AATTAAGAAT TATAGCATTT
CCGATAGTAA AATAG
|
|---|
| Protein sequence | MNLRNKLFLT IASVVLNIGF AKAMDKAVQP IQKPSKANIS KPHYQPVSLG DIKPKGWLLE
QLRVMKNGST GQMDKIYDKI KNDNGWLGGK GDNWEETPYW LDGAVPLAYQ LNDTELKAIV
LKYINWSIHN QRPSGYFGPI TKWERKTGKQ IDLANCEQAE DWWPKMIMLK VIQQYYSATQ
DESVIPFMTK YFNYQKEALK KCPIGKWSEW SQSRGTDNVM MVQWLYGHTK DESLLELAGL
INSQSFAWSQ WFGGRDWVIN AAARPNGKKW MSRHGVNVAM GLKDPAINFQ RTGDSTYLKS
LKTVFNDLMT LHGLPNGIFS ADEDLHGNQP TQGTELCATV EAMYSLEEII NITGDTHYID
ALERMTFNAM PSQTTDDYHE KQYFQMANQI EISRGVFAFT LPFDRKMNCV LGAKSGYTCC
YVNMHQGWTK FSQNLWHKTE NGLAALIYGP NTLSTKVGAQ QTDVTIEEVT NYPFEDQINF
NLSLKKAVAF PFQLRIPTWC KEAVILINGK IYSKEKGGKI ITVNRTWQNK DRLTLQLPME
IAVSEWADNS RAVERGPLVY GLKVQEKWTE GTDEKEGKYF EVHPASAWNY GLLEAVSKNP
VKETTITVKA LKKDFRWNLE NSPIEIIVKA KKIPGWKSQN GLAYLPVTGR EGFYKGAVDS
DIENVALVPV GFTKLRIIAF PIVK
|
|---|
| |