Gene Phep_1254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1254 
Symbol 
ID8252352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1478848 
End bp1480902 
Gene Length2055 bp 
Protein Length684 aa 
Translation table11 
GC content39% 
IMG OID644934907 
Productprotein of unknown function DUF1680 
Protein accessionYP_003091532 
Protein GI255531160 
COG category[S] Function unknown 
COG ID[COG3533] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.831647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.201869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTAA GAAATAAACT GTTTTTGACC ATAGCATCCG TAGTACTTAA CATTGGATTT 
GCCAAAGCCA TGGATAAGGC TGTCCAACCG ATTCAAAAGC CTTCAAAAGC AAATATTTCC
AAGCCACATT ATCAGCCAGT TTCTTTAGGT GATATTAAGC CTAAAGGCTG GCTTTTAGAA
CAGCTAAGGG TAATGAAGAA CGGCTCTACC GGCCAGATGG ATAAAATTTA TGATAAAATA
AAAAATGATA ATGGCTGGTT GGGCGGCAAA GGGGACAATT GGGAAGAAAC ACCCTATTGG
CTGGATGGTG CAGTTCCATT GGCCTACCAG TTGAATGATA CAGAACTAAA AGCTATCGTA
CTCAAATATA TCAATTGGTC CATACATAAT CAGCGTCCAT CTGGCTATTT TGGCCCGATC
ACCAAATGGG AAAGAAAAAC AGGAAAGCAG ATTGACCTTG CCAATTGCGA ACAGGCAGAA
GACTGGTGGC CTAAAATGAT TATGTTAAAA GTGATACAGC AATATTATTC TGCTACACAG
GATGAAAGCG TAATCCCTTT CATGACCAAA TATTTCAACT ATCAAAAAGA GGCATTAAAA
AAATGCCCTA TTGGAAAATG GAGTGAATGG TCACAATCTC GCGGAACAGA TAACGTAATG
ATGGTACAAT GGCTTTATGG CCATACAAAA GATGAGTCCT TATTGGAGCT GGCCGGCCTT
ATCAATTCTC AGTCTTTTGC CTGGAGCCAA TGGTTTGGTG GCAGAGATTG GGTAATCAAC
GCTGCCGCCC GCCCTAATGG AAAGAAATGG ATGAGCAGGC ATGGTGTAAA CGTTGCTATG
GGTTTAAAAG ATCCGGCTAT TAATTTTCAG CGAACGGGTG ACAGCACTTA CCTAAAAAGT
TTAAAAACTG TTTTTAATGA TTTGATGACT CTGCATGGCC TGCCCAACGG CATTTTTTCG
GCCGATGAAG ATTTACATGG CAACCAGCCA ACACAAGGCA CTGAGCTTTG TGCTACGGTA
GAGGCGATGT ATTCATTAGA AGAAATTATA AACATTACCG GAGATACACA TTACATAGAT
GCATTGGAAA GAATGACTTT TAATGCCATG CCTTCGCAAA CAACCGATGA TTATCATGAA
AAACAATATT TTCAGATGGC CAACCAAATA GAAATCAGTC GTGGTGTTTT TGCATTTACT
TTGCCTTTTG ACAGGAAAAT GAATTGCGTT TTAGGCGCAA AAAGCGGATA CACCTGTTGT
TATGTAAACA TGCATCAGGG CTGGACAAAG TTTAGCCAAA ATTTATGGCA TAAAACCGAA
AATGGTTTAG CTGCTTTAAT TTACGGCCCC AATACCTTAA GTACAAAAGT TGGTGCTCAA
CAAACCGATG TAACAATTGA AGAAGTAACA AACTATCCTT TTGAAGATCA GATCAATTTC
AATTTATCAT TAAAAAAAGC AGTAGCTTTT CCTTTCCAGC TACGCATTCC GACCTGGTGT
AAAGAAGCGG TGATTTTGAT CAACGGTAAA ATATACAGTA AAGAAAAGGG CGGAAAGATT
ATTACCGTAA ACAGAACCTG GCAAAATAAA GACCGGCTGA CTTTGCAATT GCCAATGGAA
ATCGCTGTTT CTGAATGGGC AGATAATTCA AGAGCGGTAG AACGTGGTCC ATTGGTTTAC
GGTTTAAAAG TTCAGGAAAA GTGGACTGAA GGAACGGATG AAAAAGAGGG AAAATATTTC
GAAGTTCATC CGGCATCGGC CTGGAATTAC GGCCTTTTAG AGGCAGTAAG TAAAAATCCT
GTTAAAGAAA CAACAATAAC GGTTAAAGCG CTTAAAAAAG ATTTTAGGTG GAATTTAGAA
AATTCTCCCA TAGAAATTAT AGTAAAAGCG AAAAAAATAC CGGGATGGAA ATCACAGAAT
GGTTTGGCCT ATCTTCCGGT TACTGGTCGG GAGGGGTTTT ACAAAGGAGC AGTAGACAGC
GATATAGAAA ATGTTGCTTT AGTTCCTGTC GGCTTTACTA AATTAAGAAT TATAGCATTT
CCGATAGTAA AATAG
 
Protein sequence
MNLRNKLFLT IASVVLNIGF AKAMDKAVQP IQKPSKANIS KPHYQPVSLG DIKPKGWLLE 
QLRVMKNGST GQMDKIYDKI KNDNGWLGGK GDNWEETPYW LDGAVPLAYQ LNDTELKAIV
LKYINWSIHN QRPSGYFGPI TKWERKTGKQ IDLANCEQAE DWWPKMIMLK VIQQYYSATQ
DESVIPFMTK YFNYQKEALK KCPIGKWSEW SQSRGTDNVM MVQWLYGHTK DESLLELAGL
INSQSFAWSQ WFGGRDWVIN AAARPNGKKW MSRHGVNVAM GLKDPAINFQ RTGDSTYLKS
LKTVFNDLMT LHGLPNGIFS ADEDLHGNQP TQGTELCATV EAMYSLEEII NITGDTHYID
ALERMTFNAM PSQTTDDYHE KQYFQMANQI EISRGVFAFT LPFDRKMNCV LGAKSGYTCC
YVNMHQGWTK FSQNLWHKTE NGLAALIYGP NTLSTKVGAQ QTDVTIEEVT NYPFEDQINF
NLSLKKAVAF PFQLRIPTWC KEAVILINGK IYSKEKGGKI ITVNRTWQNK DRLTLQLPME
IAVSEWADNS RAVERGPLVY GLKVQEKWTE GTDEKEGKYF EVHPASAWNY GLLEAVSKNP
VKETTITVKA LKKDFRWNLE NSPIEIIVKA KKIPGWKSQN GLAYLPVTGR EGFYKGAVDS
DIENVALVPV GFTKLRIIAF PIVK