Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1251 |
Symbol | |
ID | 8252349 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1475713 |
End bp | 1476738 |
Gene Length | 1026 bp |
Protein Length | 341 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644934904 |
Product | DNA polymerase III, delta subunit |
Protein accession | YP_003091529 |
Protein GI | 255531157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1466] DNA polymerase III, delta subunit |
TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.604271 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.540946 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGCGG CCGACATAAT AAAAGACATC AAAGCAAGGA AGTTTAAGCC CATTTACCTA TTACATGGTG AAGAGCCTTA TTATATAGAT CAGATTATCC ATTATATGGA AGAACATATC TTGAATGATA TGGAAAAGGG GTTTAACCAG ACGGTATTAT ATGGGAAGGA TACCGATATG GCTACCATTA TGAATGCAGC CAAGCGTTAT CCGATGATGT CTGATTACCA GTTGATTGTA GTGAAGGAGG CCCAGGACTT AAAATGGGCC AAGGAAACTG AGGGTAGCAG TAAGCAGGCA GAATTTGTAC TGAATTATTT TGAAAAACCT TTACCGAGTA CCATTCTGGT ACTGGGATAT AAGTATGCCA ATTTCGATAA GCGTAAAAAG ATCTATAAGG CAATAGACAA GCATGGGGTG GTTTTTCAGT CAGACCTGGT GCGAGATTAT AAACTTGCCC AGTGGATAGA GGAGCTGGTT AAGGAAAAGG GCTATAAAAT AGCACCTCAG GCATCGGCAT TGATGGCTGA ATACCTGGGC GCCGATCTTT CTAAAATAGC CAATGAGGTT GAAAAGCTGC TGTTAAATAT TGGTAAGGAA ACTATTATTG ATACCGATAT TGTTCAGAAA AACATTGGGA TCAGTAAGGA GTACAATGTT TTTGAACTGC AAAAGGCATT GGCTGTAAAA AATGTATTGA AATGTAACCA GATCATCAAT TACTTTGGTG ATAATCCTAA AGCCAATCCA ATGGTGATGG TAATGGCTAA CCTGAGTGCT TATTTTACTA AAATACTGAA ATACCACTAC TTACCGAATA AAGGCGATGC AGCTAAGGAG CTGGGTGTGA ACCCCTATTT CGTAAAAGAT TTTGAAACAG CAGCCCGAAG TTACAGTTTG CCCAAAACTT TTGATATCAT TAGTCTGTTG AGGGAATATG ATTTGAAAAG CAAGGGTGTA GACAGCACAG GAAATACCAC TGATGGTGAA CTGTTAAAAG AATTGTTGTT TAAAATGTTG CATTAA
|
Protein sequence | MSAADIIKDI KARKFKPIYL LHGEEPYYID QIIHYMEEHI LNDMEKGFNQ TVLYGKDTDM ATIMNAAKRY PMMSDYQLIV VKEAQDLKWA KETEGSSKQA EFVLNYFEKP LPSTILVLGY KYANFDKRKK IYKAIDKHGV VFQSDLVRDY KLAQWIEELV KEKGYKIAPQ ASALMAEYLG ADLSKIANEV EKLLLNIGKE TIIDTDIVQK NIGISKEYNV FELQKALAVK NVLKCNQIIN YFGDNPKANP MVMVMANLSA YFTKILKYHY LPNKGDAAKE LGVNPYFVKD FETAARSYSL PKTFDIISLL REYDLKSKGV DSTGNTTDGE LLKELLFKML H
|
| |