| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1247 |
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| Symbol | |
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| ID | 8252345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1469068 |
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| End bp | 1470237 |
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| Gene Length | 1170 bp |
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| Protein Length | 389 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934900 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003091525 |
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| Protein GI | 255531153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.374762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.534332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATAAAA CAAACACAAT AAATATGAAA GCAACAATAC AATTACCACT ATTTATAACC
CTGCTTTTTT TAATACAGTC ATGCGGACCA GAGCAGCAGA CTGCGCAGCA GGAAAGCATA
CAGGAATATC CTGTGACAAC GATCGTGAAG GGGGAGACGA TCATCAATAC AGAATATCCG
GCCACAATTG AGGGGCAGCA GAACATAGAG ATCCGTTCTA AGGTAGACGG TTTTGTGGCG
CAGATTTTTG TAGATGAGGG TGCGGCCGTA AAAAAAGGGC AATTGCTGTT CAGGATCAAT
GCCCCTCAAT ATGAGCAGGA GGTAAGGACT GCCAGTGCGG CCATTAAAAA TGCGGAGGCT
GAAGTAAATA CGGCTAAAAT GCAGGTAGAA AAAACCTTGC CACTTGTAAG GGAGGGTATT
GTAAGTGAGT ATGAACTGAA GTTGGCAAAC TTTAATTTAC ATGCCAAAGA AGCCGCACTG
CTACAGGCGA GGGCTGGTCT GGCCAACGCC CGTACCAATT TAGGCTATAC AGCGATCAGC
AGTCCGGCCG ATGGTGTTGT AGGCAGTATT CCTTACAAAA CCGGCAGCCT GGTAAGCAGT
ACCTCGGTGC AGCCACTTAC TACAGTATCC AATATCGCGC ATGTTTTTGC CTATTTCTCT
TTCAATGAAA AGCAATTTCT GGACTTTACC GACAGTTTTA CAGGAAAAAA TATGAGAGAA
AAACTGAAGC ACTTTCCCGC CGTTACGCTG TTACTGGCCA ATGGAGCTGA ATATAAAGAA
AAAGGCCGTA TGGAAAGTAT TGGCGGACTG ATCAATACAG AGACCGGTGC AGTAAATTTA
AGGGCAGGTT TTCCTAACCC CGAAGGCATC ATCAGAAGTG GCGCCAGTGC TACCATCCGT
ATCCCTTTGC AGGTAAAAGA TGCCTTGTTG ATTCCGGCCA AAGCGACCTA TGAAATGCAG
GAAAAGCTGA TGGCTGTAAC CGTAAATAAG GATGGAACAG TAAAGGTTAC GGAGATAGAG
GTTATGGATA GCCCTGCAGG TGAATTTTAT GTGGTAAAAA AGGGCCTGAA TGCGGGCGAC
CATGTGGTAA TTGAAGGTAA GGGTGGTTTG AAAGATGGTA CAAAGATCAA ACCCGTATTT
GCCAGTAAGC TCAGCACTGC TAAAAAATAG
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| Protein sequence | MHKTNTINMK ATIQLPLFIT LLFLIQSCGP EQQTAQQESI QEYPVTTIVK GETIINTEYP
ATIEGQQNIE IRSKVDGFVA QIFVDEGAAV KKGQLLFRIN APQYEQEVRT ASAAIKNAEA
EVNTAKMQVE KTLPLVREGI VSEYELKLAN FNLHAKEAAL LQARAGLANA RTNLGYTAIS
SPADGVVGSI PYKTGSLVSS TSVQPLTTVS NIAHVFAYFS FNEKQFLDFT DSFTGKNMRE
KLKHFPAVTL LLANGAEYKE KGRMESIGGL INTETGAVNL RAGFPNPEGI IRSGASATIR
IPLQVKDALL IPAKATYEMQ EKLMAVTVNK DGTVKVTEIE VMDSPAGEFY VVKKGLNAGD
HVVIEGKGGL KDGTKIKPVF ASKLSTAKK
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