Gene Phep_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1234 
Symbol 
ID8252332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1453019 
End bp1453972 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content48% 
IMG OID644934887 
Productaldo/keto reductase 
Protein accessionYP_003091512 
Protein GI255531140 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0495818 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA GACAATTAGG CCAGTCAGAC CTGCAGGTTT ATCCCATCAC CTTTGGTGGA 
AACGTATTCG GCTGGACCAT AGATGAGCAG CAATCCTTCG AAATCCTGGA CGGGTTTACC
GCAGCCGGGT TCAATTTTAT TGATACGGCC GACTCCTATT CGCATTGGGT ACCCGGAAAT
AAAGGTGGTG AATCTGAAAC CATCATCGGC AACTGGATGG CACAGAGAAA AAACCGGGAG
CAGGTAATCC TGGCCACCAA AGTAGGTTCT ATACCAGGTT CAGATAAAAA AAGCCTGGCC
AAAGATTATA TCCTTAAATC TGTTGATGCG TCTTTAAAAA GATTGAAAAC CGATTATATC
GATTTGTACC AGTCGCATTA TGACGACCCG GAAACACCAA TTGAAGATAC ACTTGAAGTA
TATGACCGCC TGATCAGGGC CGGAAAGGTA CGCTGGATAG GTGCCTCCAA TTTTTCGGCG
GTACGCCTGC GCACTGCACT GGAAACTGCC GACAGGCTGG GCCTGCCCAG GTACCAGAGT
TTTCAGCCCG AATATAACCT TTACCAGCGC GAGGCTTATG AAAAAGAGCT GGAACAGGTA
GTGGTAGACC ATCAGCTGGG CGTAATCAAT TATTATGCAC TCGCCAGTGG CTTTTTAACC
GGAAAATACC GGTCTGAAGC TGATCTGGAC AAAAGCAAGC GTGGCGCCGG CATTAAAAAA
TATCTTAACG ACCGGGGCTT TAAAATATTA AAGGCATTGG ACCAGGTTGC CGAACAGTAC
AATGCCAATC CGGCCAGTAT AGCCCTGGCC TGGCTGCTGG CAAGGCCATC CGTTACTGCA
CCTATTGCCA GTGTAACCAG CCTGGCGCAG CTGGAAGACC TGGTTAAAGC CGCCACATTG
AAATTAAATG TGGAAGACAT AGCGATACTT GACGAGGCCA GCGACTGGCA GTAA
 
Protein sequence
MKKRQLGQSD LQVYPITFGG NVFGWTIDEQ QSFEILDGFT AAGFNFIDTA DSYSHWVPGN 
KGGESETIIG NWMAQRKNRE QVILATKVGS IPGSDKKSLA KDYILKSVDA SLKRLKTDYI
DLYQSHYDDP ETPIEDTLEV YDRLIRAGKV RWIGASNFSA VRLRTALETA DRLGLPRYQS
FQPEYNLYQR EAYEKELEQV VVDHQLGVIN YYALASGFLT GKYRSEADLD KSKRGAGIKK
YLNDRGFKIL KALDQVAEQY NANPASIALA WLLARPSVTA PIASVTSLAQ LEDLVKAATL
KLNVEDIAIL DEASDWQ