| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1229 |
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| Symbol | |
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| ID | 8252327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1447993 |
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| End bp | 1448976 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644934882 |
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| Product | helix-turn-helix- domain containing protein AraC type |
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| Protein accession | YP_003091507 |
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| Protein GI | 255531135 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.134279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACACA TATCAGTTCT GGTACCAACA GGGGCTGCAG CATTAAGCTG TATTGAAGGC
CCGTTTACTT TGTTCAATAA AGTGAATGAT TTTTTAGCTG CTATCGGTAA ACCCCCAATG
TTCATTGTCC AGCTTGTTGG CCTCAGTAAA GAGCCCCGGG TTTACGACAG GTTGTTCAGG
GTGTACCCTG ATCTGGTGCT TGCTGAGGTT TACAAAACAG ACCTGATCAT TATACCCGCG
GTAAATGGGG ATATGGAAAC TGTCATTGCC GAAAACAATG ATTTTTTTCC CTGGATAACG
GCCCAATATA AAGCAGGGGC AGAAGTGGCC AGTTTATGCG TGGGTGCTTT TTTACTGGCG
GCAACGGGAC TGGTAAAAGG AAAACGCTGT GCCACGCACT GGCTGTCGGC CCATCAGTTC
AGTAAGATGT TCCCCGATGT GGAAATGGTA TCTGATAAAG TGGTAACCGA TGAAAACGGA
ATTTATTCGA GCGGCGGGGC AAACTCTTTC TGGAACCTGT TGTTGTACCT GATCGAAAAA
TATACCGGCC GCGAAATGGC CATCCTTTCT GCAAAATACT TTGCCATTGA AATAGACCGC
AGTAACCAGT CCTCCTTTAT CATGTTTAAA GGGCAGCGCG ACCATCAGGA CGATTCTGTA
AAAAAAGCCC AGGATTTTAT AGAACTTAAT TTCCAGGAAA AAATAAGTGT AGACCAGTTG
TCGGATATGC TGGCCATTGG CCGTAGAAGT TTTGAACGCC GTTTTAAAAA GGCCACCACC
AATACGGTGG CCGAATACAT ACAGCGTGTA AAAATAGAAG CGGCAAAGAA GGATTTTGAG
ACCAGCCGTA AAAACATTAC AGAAGTGATG TGCGATGTGG GCTATTCAGA TACCAAGGCC
TTTAGAACGA TTTTTAAGAA AAACACAGGG CTATCACCTA TAGAATACCG CAATAAGTAC
AATAAAGAGG CCCTGGCGCT GTAA
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| Protein sequence | MKHISVLVPT GAAALSCIEG PFTLFNKVND FLAAIGKPPM FIVQLVGLSK EPRVYDRLFR
VYPDLVLAEV YKTDLIIIPA VNGDMETVIA ENNDFFPWIT AQYKAGAEVA SLCVGAFLLA
ATGLVKGKRC ATHWLSAHQF SKMFPDVEMV SDKVVTDENG IYSSGGANSF WNLLLYLIEK
YTGREMAILS AKYFAIEIDR SNQSSFIMFK GQRDHQDDSV KKAQDFIELN FQEKISVDQL
SDMLAIGRRS FERRFKKATT NTVAEYIQRV KIEAAKKDFE TSRKNITEVM CDVGYSDTKA
FRTIFKKNTG LSPIEYRNKY NKEALAL
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