| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1227 |
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| Symbol | |
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| ID | 8252325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1444890 |
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| End bp | 1447253 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934880 |
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| Product | ATP-binding region ATPase domain protein |
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| Protein accession | YP_003091505 |
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| Protein GI | 255531133 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.570195 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGGTAA GGAAATATTT TTATAGCGCA TTGCTTTTGC TTTGCTGCTT GACAAATTAT
GGTTTTGCAG CTGAGACAAC AGTTCAACTT GCAAAAGGTG GCATAATAGA TCTTCGTGCG
CAGTCAATGG ATGGAAAAAT TGCGCTCAAT GGTCAGTGGC TTTTTTATTG GGGCCAGCTT
ATAGGTCCAA ATGACCACCT TAAACATAAA GGGGAACTGG TAGACTTTCC TTACAGGTGG
ACCGACCGCT CACCTTCCGG AAAAACCTAT CCTTCGTATG GTTACGCCAC TTACCGGCTT
ACTGTATTGC TGCCAAAAAA CACGCCATCA TTACGCCTGT CCATGCCCGA AGCTTATTCG
GCCTATCGCC TGTTTATCAA TGCGCAGGAG GTCGCTTCCA ACGGACGTGT GGCCAGGACC
GCAACCGATT TTATTCCCTA CTGGGAAAAT AAGATCATAG AAATCCCGCA GCATACCGAT
ACCTTAAACA TCCTGCTGCA AATTGCAAAT TTTAGCCATA GCAAAGGCGG AATTAAAAAG
CCCTTGTTAA TTGGGGAAAA AGGTTTTGTC ATTTTAAAAA GAAAACAAGC TGAAGCAGTT
GACCTATTGT TGACCGGCTG TCTGATGATG GGGGGACTTT TCTTTCTGGG ACTTTACCTG
ATGGGGAGCA GGGACAAGGC CATCCTATTG TTTGCCTTAT ACTCTATTGT TTACAGTTAC
AGGATTATTG GGATAGACAA TTATGTACTG CATACCGTAC TACCCCAGAT GGACTGGTAC
CTTACGGTAA GGATGGAATA CCTGAGCTTG TTTTTAGGCA TAGGCATGTT TGCCTTGTAT
ACCCGGTATT TATACCCTCA GGATACGAGT ATAATTGTTA TAGGCACCAT TTTCAGCCTT
TGCTTTGGCT TTTCCCTGGC AGTACTTTGT CTGAAACCCC TGTATTTTAC CCAATTGATA
AATCCTTTTC TGGTTATCAT GATCTTTTGT CTGGTGTACG TTCCCTATGT ATATACAATG
GCCTATAGAA AAAAGAGACC GGGAGCTATT TATACCTTAA TGAGCGCAGT TGCCCTTATG
CCTGTATTTG CCATTTCATT ATTGCATTAC TGGAATGTCA TCCCCGCCTT TCAGCTGGTC
TCTTTCATTT TTTACATCAG TTTTTTCTTC CTTCAGTCAC TGATACTCTC GCACAGGGTT
TCTTTTGAAC AGAAAAAGGC CAGGGCCGAG GCAGAGCAGG GCTTAAAAGC CAAAAGCGAA
TTCCTGAGTA CCATGAGCCA TGAGATCAGG ACACCACTAA ATGCGGTGAT CGGAATGAGT
CATTTGCTAC TGAAAAACGG GCCAAGGGAA GACCAGAAAG AACAGCTTGA TGTGATGCTC
TTTTCTGCCA ATAATTTGCT TTCTATTGTA AATGACATTC TGGATTATAA TAAAATTGAG
GCGGGAAAAG TTTCTTTTGA GCACATAGAA ATGGACATTC CGGCCATTGC CGGAAATATT
GTTTCGGGAC TTCAAAGTTC TGCGCATGAT AAAGGGATTG AATTGACATT GCATGTAGAC
CCGGCTTTAA AGAACAAACT AATGGGCGAC CCGACCCGCA GTTCTCAGGT CATTACCAAC
CTGGTACACA ATGCCATAAA ATTTACAAAT AAGGGTTCTG TAGAAGTGAG ATTGATTGTA
GCTGCGCAGA CGGAAACTGA TATTACCTTA AATATCCAGG TTAAAGATAC CGGTATCGGC
ATTTCAAAAG ATAAGCAAAA AGTTATTTTC GACAGGTTTA CGCAGGTTGA CTCTTCTACA
TCAAGGGGAT TTGGCGGTAC AGGACTGGGC CTTTCCATTT GTAAAAGGAT CCTGGAACTC
CAAAATTCAT CCCTAAACCT GATTAGCGAT GAGGGCAGGG GCTCTACTTT CTATTTTATA
CAAACTTTTG AGAAAAGCAC CAAAATTTTA AAGCGTCTGG ATCCGGAACA CCTGCCCAAC
GAGAATGATA AACCGCTTAC AGGCATACCT ATTTTACTGG TAGAGGACAA CCTGATGAAC
GTACTGGTAG CGCAAAAATA TCTGGAACGC TGGGGAGCAA CGATAGATGT TGCCCTAAAC
GGACAGGAAG CCCTGGAAAA ACTGGATGTG AACAGGCATC AGCTGGTTTT GATGGACCTG
CACATGCCCA TAATGGATGG CTATAAAGCT GCTGCAACCA TGCGTGAAAA TGGAGTGACC
ATCCCTATTG TTGCCCTTAC AGCCAACTTG CCTGATGAAA TAGCATTACG GGTAAAGGAA
GCGGGCATTA ACGATATGGT GATCAAACCC TTTTTGCCTG ATGAGCTGTA CAGGAAAGTA
CTGCACCATA TTTTTAGTCT ATAA
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| Protein sequence | MRVRKYFYSA LLLLCCLTNY GFAAETTVQL AKGGIIDLRA QSMDGKIALN GQWLFYWGQL
IGPNDHLKHK GELVDFPYRW TDRSPSGKTY PSYGYATYRL TVLLPKNTPS LRLSMPEAYS
AYRLFINAQE VASNGRVART ATDFIPYWEN KIIEIPQHTD TLNILLQIAN FSHSKGGIKK
PLLIGEKGFV ILKRKQAEAV DLLLTGCLMM GGLFFLGLYL MGSRDKAILL FALYSIVYSY
RIIGIDNYVL HTVLPQMDWY LTVRMEYLSL FLGIGMFALY TRYLYPQDTS IIVIGTIFSL
CFGFSLAVLC LKPLYFTQLI NPFLVIMIFC LVYVPYVYTM AYRKKRPGAI YTLMSAVALM
PVFAISLLHY WNVIPAFQLV SFIFYISFFF LQSLILSHRV SFEQKKARAE AEQGLKAKSE
FLSTMSHEIR TPLNAVIGMS HLLLKNGPRE DQKEQLDVML FSANNLLSIV NDILDYNKIE
AGKVSFEHIE MDIPAIAGNI VSGLQSSAHD KGIELTLHVD PALKNKLMGD PTRSSQVITN
LVHNAIKFTN KGSVEVRLIV AAQTETDITL NIQVKDTGIG ISKDKQKVIF DRFTQVDSST
SRGFGGTGLG LSICKRILEL QNSSLNLISD EGRGSTFYFI QTFEKSTKIL KRLDPEHLPN
ENDKPLTGIP ILLVEDNLMN VLVAQKYLER WGATIDVALN GQEALEKLDV NRHQLVLMDL
HMPIMDGYKA AATMRENGVT IPIVALTANL PDEIALRVKE AGINDMVIKP FLPDELYRKV
LHHIFSL
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