Gene Phep_1224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1224 
Symbol 
ID8252322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1442162 
End bp1443388 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content43% 
IMG OID644934878 
Producthypothetical protein 
Protein accessionYP_003091503 
Protein GI255531131 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.367395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACAAT TCTTCACAAA CACCCTGCAC ATTGTTCTGG TATCGATCCT GCTTCAGGCT 
TGTGGTCCTT CAACATCGGT TGCAGCCAAT CCAGGGAAAA GAAAACTACT TACCGGTGCA
GAGCAAACAA ACCTTTACGT ACCTTATTTA AAAGGTAAAC GGGTAGGGAT GGTGGTAAAC
CCTACTTCAA TTATTGGCAA AGAAACTACG GTGGACAGCC TGCTGAAGCT TGGTGTGAAC
ATTGTGAATA TATTTGGCCC CGAACACGGT TTTAGGGGGA ACGCCAGTAA CGGTACACAT
GTAGACGATG AAGTTGACCA AAAGACAGGG ATCAAGGTGA TCTCCTTATA TGGAAAGCAT
GCTATCCCGA CTAAAGAAGA GCTGGCAAAC ATAGACATTA TGGTGTTCGA CATACAGGAT
GTTGGTGTAC GTTTTTACAC CTATATCAAT ACCTTGCAAC ACGTAATGGA AGCCTGTGCT
GCCAATAACA AAGAGGTACT GATATTGGAC AGGCCCAACC CCAACGGCTT TTATATTGAT
GGCCCTATAC TGGACCCCAA GTTTAAATCG GGCATTGGTT TAAAACCAAT TCCGGCAGTA
CATGGCTTAA CAGTTGGTGA ATATGCCCAG ATGTTAAATG GTGAAAACTG GCTGGACAAC
AAGCTAAAAT GCAAGATCAG GATCATTAAA GTAGCCAATT ATACCCATGA TACCCCCTAT
GAGCTGCCGG TAAGCCCTTC ACCAAACTTA AATACCCCGC AATCTATTTT ACTTTACCCA
ACTACCTGCC TGTTTGAAGG CACGTACTTA AATTATGGCC GCGGCACCCA GTTTCCGTTT
ACCATTGTAG GTGCCCCCGC CTTAAAAGGT AAATACAGTT TTTCTTTTAC ACCTGTAAGC
ATCAAGGGTA TGTCGGAAAG CCCATTGTTC ATGAACCAGG TTTGTTACGG GCTGGACCTT
AGAAATTATG ACACCGGTAA CTTCAGGAAG ACCAAACAGA TCAATCTGGG CTGGATGATA
GAACTTTATA AGAATTCGCC AAATAAGGCA GATTTTTTTA ACTCCAAACT GAGCAATCAG
ATGGGCACTA TTGAAAAATT GATCGGGGTG GCAGAATTCA GGCAACAGAT CATTGCAGGT
AAATCAGAAA AAGAGATCAG GGCCAGCTGG GAACCCGGCT TAAGCAAGTA TAAAACAATG
CGTAAAAAAT ATTTGTTGTA TCCGTAG
 
Protein sequence
MAQFFTNTLH IVLVSILLQA CGPSTSVAAN PGKRKLLTGA EQTNLYVPYL KGKRVGMVVN 
PTSIIGKETT VDSLLKLGVN IVNIFGPEHG FRGNASNGTH VDDEVDQKTG IKVISLYGKH
AIPTKEELAN IDIMVFDIQD VGVRFYTYIN TLQHVMEACA ANNKEVLILD RPNPNGFYID
GPILDPKFKS GIGLKPIPAV HGLTVGEYAQ MLNGENWLDN KLKCKIRIIK VANYTHDTPY
ELPVSPSPNL NTPQSILLYP TTCLFEGTYL NYGRGTQFPF TIVGAPALKG KYSFSFTPVS
IKGMSESPLF MNQVCYGLDL RNYDTGNFRK TKQINLGWMI ELYKNSPNKA DFFNSKLSNQ
MGTIEKLIGV AEFRQQIIAG KSEKEIRASW EPGLSKYKTM RKKYLLYP