| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1222 |
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| Symbol | |
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| ID | 8252320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1440870 |
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| End bp | 1441919 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934876 |
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| Product | DNA topoisomerase |
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| Protein accession | YP_003091501 |
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| Protein GI | 255531129 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3569] Topoisomerase IB |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCA GTCCCGAGGA AATTAAAGAA ATTGGTCTGG TTTACCTAAC AGATAGCCAG
CCAGGGATAT ACAGAAAGGG GAAGCCCGGA AAATTTTATT ATACAGACAA CCATGGTAAC
CGCATTACCG ATCCCGGTCA GCTCGACAGG ATCAAAGCAT TGGTGCTGCC CCCGGCATGG
ACCGGGGTTT GGATTGCACC AAAGAAAAAT GCGCATTTGC AGGCTACCGG TATGGATGCA
GCGGGTCGGA AACAGTATAA ATATCATGCA GTGTGGACTT CCCGCAGGTC GGACAGCAAA
TATTTCAGAC TGCTGGAATT TGGTAAAGTT TTGCCCCAGG CCCGTAAAAG GATAGCTAAA
GATTTGCGGA GAAAAGAGCT GGATGAACAG AAAGTGCTGG CAATTTGTGT ACAGCTCATG
CAAAAAACAT TGATCCGTGT GGGTAATGAG GCTTATAAAC AGCTATATGG GAGTTACGGA
TTAAGTACTT TAAAAGACAA ACATGTGAAA ATTAATGGCC ATGCCATGAA ATTGAGTTTT
GTGGGAAAAA AAGGCGTGAA ACAAGAGGTC GTACTGAACG ATAAAACCCT CAGCAGGTTG
GTAAAAAAGT GCAGGGACAT TCCCGGGCAG GATCTTTTTC AGTATTATAC CAATGGCAAT
GAACATAAGC CCGTAGATTC CGGACGGATT AACAATTACA TCAAAGAAAT TACCGGAAGT
GATTTTACGG CAAAAGATTT CCGTACCTGG GGTGGTACAC TGGAGGCCCT GAGGCAGCTG
GCAGTTTGCA GTATTGCCGC TGATGAAAGG CCAAAAAAGA AATTGGTAGT GGAAGTGCTG
GATTGTGTGG CCGCAAAACT GGGCAATACG CGTGCAGTTT GCAAAAGTTC GTATGTTTAT
CCCTTACTGC TGCAGACCTT TGAGGATAAT CAGCTGGACA AATACCTGAA AATGATCAGT
ACAGATCAGC CGGATACAAT TAAGGCCCTG GAAAATGATG AAAAAGTATT GATGAAGTTT
TTAAGGGCCG CCCAAAAGAA TAAATTGTAG
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| Protein sequence | MTGSPEEIKE IGLVYLTDSQ PGIYRKGKPG KFYYTDNHGN RITDPGQLDR IKALVLPPAW
TGVWIAPKKN AHLQATGMDA AGRKQYKYHA VWTSRRSDSK YFRLLEFGKV LPQARKRIAK
DLRRKELDEQ KVLAICVQLM QKTLIRVGNE AYKQLYGSYG LSTLKDKHVK INGHAMKLSF
VGKKGVKQEV VLNDKTLSRL VKKCRDIPGQ DLFQYYTNGN EHKPVDSGRI NNYIKEITGS
DFTAKDFRTW GGTLEALRQL AVCSIAADER PKKKLVVEVL DCVAAKLGNT RAVCKSSYVY
PLLLQTFEDN QLDKYLKMIS TDQPDTIKAL ENDEKVLMKF LRAAQKNKL
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