| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1221 |
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| Symbol | |
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| ID | 8252319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1439895 |
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| End bp | 1440809 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644934875 |
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| Product | methionyl-tRNA formyltransferase |
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| Protein accession | YP_003091500 |
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| Protein GI | 255531128 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0223] Methionyl-tRNA formyltransferase |
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| TIGRFAM ID | [TIGR00460] methionyl-tRNA formyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.820089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTAG TTTTTATGGG TACGCCCGAT TTTGCTGTTG CTGCGCTGGA TGCGCTTGTA
AAAGCCGGAT TTGAGGTAGC AGGTGTGGTT ACTGCGGCGG ATAAACCTGC CGGCCGGGGA
CAAAAACTAC AGGAAAGTGC GGTAAAGCAA TATGCTGTTG CCCATGGTCT GAAAGTACTG
CAGCCCTTAA AATTAAAAGA CCCTTTGTTT CTGTCAGACC TGAAAGCACT AAATGCTGAT
TTACAGGTGG TGGTGGCTTT CAGGATGTTA CCCGAAGTGG TATGGAACAT GCCCCCAAAA
GGCACCATTA ACCTGCATGC TTCACTACTG CCCCAGTACC GGGGTGCTGC GCCCATTAAC
CACGCCATCA TAAATGGCGA AAAAGAGAGC GGTGTAACCA CTTTTTTCCT GAAACACGAA
ATTGACACGG GTGATGTGAT CTTTTCGGAA AAAGTTGAAA TTACTGATGA AGATACCGCC
GGAGATCTGC ACGACAAACT GATGCATACA GGTGCCGACC TGTTGGTAAG GACCGTAAAA
GCCATTGAAG CCGGGGACTA TAAAGAACAG CCCCAGCCTG ATGCAGCACA GGAGGAATTA
AAACATGCCC CTAAAATATT TAAGGAGCAT TGCCTGATTG ACTGGAACCA GCCGTCAAAA
AACATTTACA ACCTTATCCG TGGGTTAAGC CCCTATCCTA CCGCTTTTAC CAGATTGAAC
GACAAGGTCC TTAAGATATT TAAAGCAGAA CTGGAAGAAA AAGAAACAGG CCTGGCTGCC
GGTGCCTTCC TGTCTGACGG AAAGAGCTAT CTTAAGTTTG CCGCAAAAGA TGGGTTCATT
AAACTCACAG ATCTGCAATA TGAAGGCAAA AAACGAATGA CCGTAGATGA ATTTTTGAGA
GGGATGCGCT TGTAA
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| Protein sequence | MRLVFMGTPD FAVAALDALV KAGFEVAGVV TAADKPAGRG QKLQESAVKQ YAVAHGLKVL
QPLKLKDPLF LSDLKALNAD LQVVVAFRML PEVVWNMPPK GTINLHASLL PQYRGAAPIN
HAIINGEKES GVTTFFLKHE IDTGDVIFSE KVEITDEDTA GDLHDKLMHT GADLLVRTVK
AIEAGDYKEQ PQPDAAQEEL KHAPKIFKEH CLIDWNQPSK NIYNLIRGLS PYPTAFTRLN
DKVLKIFKAE LEEKETGLAA GAFLSDGKSY LKFAAKDGFI KLTDLQYEGK KRMTVDEFLR
GMRL
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