| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1200 |
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| Symbol | |
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| ID | 8252298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1420898 |
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| End bp | 1421725 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934855 |
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| Product | peptidase M48 Ste24p |
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| Protein accession | YP_003091480 |
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| Protein GI | 255531108 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.724049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAT TATTGATTGT TGGCACAACC GCTGTATTGC TGGCGCTATC ATCCTGCTCT
ACAGTTCCGC TGACCGGCAG GAGCAGATTA AACCTGGTTA GCAATGATCA GGTATTACCG
ATGGCCTTTC AGGCTTACAA CGAGTTTTTA ACGGAAAATA AAGGTGCGGT GCTCTCGGCC
TCTAATGCAG ATGCCCAAAG GGTAAAGCGG ATCGGGAATA CCCTGATCGC ATCGGTTAAA
AATTATATGA ACAACAATAA CTATGGCGAT CTGATCAAAG ATTATAAATG GGAAGTGAAT
GTAGTTCAGA GTAAAGAGTT AAATGCCTGG TGCATGCCGG GCGGTAAAAT AGTCGTTTAC
ACAGGCCTGT TGCCCGTTAC AAAAGACGAT GCTGGTTTGG CTACTGTAAT GGGGCATGAG
ATTGCCCATG CCATAGCCGG GCATTCAGCC GAACGGATGT CGCAGCAAAT GGTTGCGCAG
GGGGTTGGTG TTTTAGGTAA TGTGGCTACA GCCAACAATG AAAAAAAGCA ATCTGTATTT
AATACGCTTT ATGGTGTAGG AACACCCCTG GTGATGTTAA GTTATGGTCG TAACCAGGAG
CTCGAAGCAG ATAGGCTGGG GCTGATCTTC ATGGCAATGG CAGGTTATAA CCCTCAAACT
GCTATTGCTT TCTGGCAAAG GATGGCTGCA GCATCGCAAA GCGGACAAAA ACCACCTGAA
TTTTTAAGTA CGCACCCCAG TGATGCGACC AGGATTGCGC AGATACAAAG GATTTTGCCC
GAGGCCCAGC GATACTATAA ATCTACCAAC GGGAAACCGG TTAACTGA
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| Protein sequence | MKRLLIVGTT AVLLALSSCS TVPLTGRSRL NLVSNDQVLP MAFQAYNEFL TENKGAVLSA
SNADAQRVKR IGNTLIASVK NYMNNNNYGD LIKDYKWEVN VVQSKELNAW CMPGGKIVVY
TGLLPVTKDD AGLATVMGHE IAHAIAGHSA ERMSQQMVAQ GVGVLGNVAT ANNEKKQSVF
NTLYGVGTPL VMLSYGRNQE LEADRLGLIF MAMAGYNPQT AIAFWQRMAA ASQSGQKPPE
FLSTHPSDAT RIAQIQRILP EAQRYYKSTN GKPVN
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