Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1200 |
Symbol | |
ID | 8252298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1420898 |
End bp | 1421725 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934855 |
Product | peptidase M48 Ste24p |
Protein accession | YP_003091480 |
Protein GI | 255531108 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.724049 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGAT TATTGATTGT TGGCACAACC GCTGTATTGC TGGCGCTATC ATCCTGCTCT ACAGTTCCGC TGACCGGCAG GAGCAGATTA AACCTGGTTA GCAATGATCA GGTATTACCG ATGGCCTTTC AGGCTTACAA CGAGTTTTTA ACGGAAAATA AAGGTGCGGT GCTCTCGGCC TCTAATGCAG ATGCCCAAAG GGTAAAGCGG ATCGGGAATA CCCTGATCGC ATCGGTTAAA AATTATATGA ACAACAATAA CTATGGCGAT CTGATCAAAG ATTATAAATG GGAAGTGAAT GTAGTTCAGA GTAAAGAGTT AAATGCCTGG TGCATGCCGG GCGGTAAAAT AGTCGTTTAC ACAGGCCTGT TGCCCGTTAC AAAAGACGAT GCTGGTTTGG CTACTGTAAT GGGGCATGAG ATTGCCCATG CCATAGCCGG GCATTCAGCC GAACGGATGT CGCAGCAAAT GGTTGCGCAG GGGGTTGGTG TTTTAGGTAA TGTGGCTACA GCCAACAATG AAAAAAAGCA ATCTGTATTT AATACGCTTT ATGGTGTAGG AACACCCCTG GTGATGTTAA GTTATGGTCG TAACCAGGAG CTCGAAGCAG ATAGGCTGGG GCTGATCTTC ATGGCAATGG CAGGTTATAA CCCTCAAACT GCTATTGCTT TCTGGCAAAG GATGGCTGCA GCATCGCAAA GCGGACAAAA ACCACCTGAA TTTTTAAGTA CGCACCCCAG TGATGCGACC AGGATTGCGC AGATACAAAG GATTTTGCCC GAGGCCCAGC GATACTATAA ATCTACCAAC GGGAAACCGG TTAACTGA
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Protein sequence | MKRLLIVGTT AVLLALSSCS TVPLTGRSRL NLVSNDQVLP MAFQAYNEFL TENKGAVLSA SNADAQRVKR IGNTLIASVK NYMNNNNYGD LIKDYKWEVN VVQSKELNAW CMPGGKIVVY TGLLPVTKDD AGLATVMGHE IAHAIAGHSA ERMSQQMVAQ GVGVLGNVAT ANNEKKQSVF NTLYGVGTPL VMLSYGRNQE LEADRLGLIF MAMAGYNPQT AIAFWQRMAA ASQSGQKPPE FLSTHPSDAT RIAQIQRILP EAQRYYKSTN GKPVN
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