| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1193 |
|---|
| Symbol | |
|---|
| ID | 8252291 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1413420 |
|---|
| End bp | 1415921 |
|---|
| Gene Length | 2502 bp |
|---|
| Protein Length | 833 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644934848 |
|---|
| Product | ATP-dependent protease La |
|---|
| Protein accession | YP_003091473 |
|---|
| Protein GI | 255531101 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
|---|
| TIGRFAM ID | [TIGR00763] ATP-dependent protease La |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTCAG ATTGTCGTTT TTTATTTAGA AAGACTTATT TAATGAGTAA ACAAGATCCG
TTCGATTTTA GCAATGCATT ACCTATCATA AACGAAGACA CTGAATTCTT TCCATTGATG
TCCCAACAGG ATGAAGATGA GATGAATAAT GAGGATACCC CTGAAATTCT GCCTATACTT
CCACTCCGGA ACACGGTGCT TTTTCCGGGT GTGGTTATCC CCATTACTGT GGGCCGCGAC
AAATCTATCA AACTTATAAA GGAAGCCTAC AAAGGTGACA GGATCATTGG CGTGGTCTCC
CAGCGTGACG TTTCTATCGA AGACCCTACA TTTGAGCAGT TGAACAGTGT AGGTACCGTT
GCCCATATCA TCAAAATGCT GCAAATGCCA GATGGCAACA CTACGGTAAT TATTCAGGGA
AAACAACGTT TCCGCTTACT GGAAGAGGTA CAATCTGAGC CTTATATTAA AGTTACCATC
AGCAAATTTG CCGAGACCAA GCACAAATCC GATAAAGAAT TTAAAGCATT GGTGGCCTCT
ATCAAGGAAA TGTCTGCCCA GATCATCCAG CTATCGCCTA ATATTCCAAG CGAGGCCGGA
ATTGCATTAA AAAACATAGA AAGCACCTCT TTTTTAATCA ACTTCATCTC TTCTAACATG
AATGCAGATG TAACTGATAA ACAAAAGATG CTGGAAATGA CAAACCTGCG CGAACGTGCC
ATGATGGTAA TGGAGCTGCT TACCCTGGAA CTTCAGATGC TGGAACTTAA AAACCAGATC
CAGTCGAAAG TACGTACCGA CCTCGACAAG CAGCAAAGGG ATTATTTCCT GAACCAACAG
TTAAAAACCA TTCAGGAAGA ACTGGGAGGC AACTCTTCCG ACCTGGAATA CGAAGCGCTG
GAAAGCCGCG CAAAAAAGAA AAAATGGGAC ATTCATGTTA AAGACCATTT TAACAAAGAA
CTGGAAAAAC TGGGCAGAAT GAACCCTGCT GCCCCCGATT ATTCTGTTCA GATCAATTAC
CTGGAACTGT TGCTTGACCT GCCATGGGGC GAGTTTACCA AAGATAATTT CGACCTTAAA
CGTGCACAGC GTGTACTCGA CAAAGACCAC TTCGGACTGG AAAAGGTGAA GCAGCGCATT
ATAGAATATT TAGCAGTATT GAAGCTAAAA CGTGACATGA AGGCCCCGAT TATTTGTCTG
GTTGGCCCTC CGGGAGTAGG TAAAACCTCG CTGGGAAAAT CAATTGCCAA AGCGTTGAAC
CGTAAATATG TGCGTATGGC CTTAGGAGGT ATCAAGGATG AGGCTGAAAT CCGTGGTCAT
AGAAAAACTT ATATAGGGGC CATGCCGGGC CGTATTATAC AGTCGATCAA AAAGGCAGGT
GCATCTAACC CAGTATTTGT ATTGGATGAG ATTGATAAAG TGGGCTCAGA CTTCAGGGGC
GACCCTTCTT CTGCCCTGCT TGAGGTATTG GACCCGGAAC AGAACAGTGC TTTTAACGAC
CATTATGTAG AAACAGATTA TGACCTGTCC AATGTCCTGT TTATTGCAAC GGCCAATTCA
CTCAGTTCCA TCCATCCGGC ACTGTTAGAC CGTATGGAGA TCATTGAAGT AAACGGTTAT
ACCATTGAAG AAAAGATAGA GATTGCCAAA AAATATCTTT TACCTAAGCA AAAAGAGCAA
CATGGCATAA AAACAAAAGA TATTACCTTA AAAAATAATT TAATTGAAAA GGTGATTGAA
GACTATACCA GGGAATCTGG TGTAAGGGGA CTCGAGAAAA AGATCGGCTC ACTGGTACGC
GGTGTGGCCA CCAAAATTGC TATGGAGGAA AGCTATGATC CGGCACTTAG CCTGGATGAT
GTAGAGCGCA TTTTAGGTGC CCCCCTTTAT GATAAAGACT TATACGAAGG CAATGAAGTA
GCGGGTGTGG TAACCGGTTT GGCCTGGACA CAGGTAGGTG GCGACATTCT GTTCATTGAA
GCCAGCTTAA GCCCTGGTAA GGGCAAACTG ACCCTTACAG GTAACCTGGG CGAGGTAATG
AAAGAATCAG CTATTATTGC CTTAGCCTAT TTACGTGCCC ATGCCGAATT GTTTAACATA
GATTATGCCC TGTTTGATCA ATGGGATGTG CATGTGCATG TTCCGGCAGG TGCAACACCT
AAAGATGGCC CGTCGGCAGG GATAACCATG CTAACAGCAC TTACATCGGC CTTTACCCAG
CGTAAAGTAA AATCTAACCT GGCAATGACT GGCGAGATTA CCCTTAGGGG AAAAGTTTTA
CCTGTTGGTG GTATCAAAGA AAAGATCCTT GCGGCAAAAC GTGCCAATAT CAAAGACATT
ATTTTATGTA AGTCGAACCG TAAGGACATT CTGGAAATTA AAGAAAGCTA TATCAAAGAC
CTGAATTTCC ATTATGTTAC AGAAATGAAG GAAGTGATAG ACCTGGCCTT AACTAAAGAA
AAAGTAAGGA ACCCGCAAAA TTTAACTGTA AAGCCCAAAT GA
|
|---|
| Protein sequence | MLSDCRFLFR KTYLMSKQDP FDFSNALPII NEDTEFFPLM SQQDEDEMNN EDTPEILPIL
PLRNTVLFPG VVIPITVGRD KSIKLIKEAY KGDRIIGVVS QRDVSIEDPT FEQLNSVGTV
AHIIKMLQMP DGNTTVIIQG KQRFRLLEEV QSEPYIKVTI SKFAETKHKS DKEFKALVAS
IKEMSAQIIQ LSPNIPSEAG IALKNIESTS FLINFISSNM NADVTDKQKM LEMTNLRERA
MMVMELLTLE LQMLELKNQI QSKVRTDLDK QQRDYFLNQQ LKTIQEELGG NSSDLEYEAL
ESRAKKKKWD IHVKDHFNKE LEKLGRMNPA APDYSVQINY LELLLDLPWG EFTKDNFDLK
RAQRVLDKDH FGLEKVKQRI IEYLAVLKLK RDMKAPIICL VGPPGVGKTS LGKSIAKALN
RKYVRMALGG IKDEAEIRGH RKTYIGAMPG RIIQSIKKAG ASNPVFVLDE IDKVGSDFRG
DPSSALLEVL DPEQNSAFND HYVETDYDLS NVLFIATANS LSSIHPALLD RMEIIEVNGY
TIEEKIEIAK KYLLPKQKEQ HGIKTKDITL KNNLIEKVIE DYTRESGVRG LEKKIGSLVR
GVATKIAMEE SYDPALSLDD VERILGAPLY DKDLYEGNEV AGVVTGLAWT QVGGDILFIE
ASLSPGKGKL TLTGNLGEVM KESAIIALAY LRAHAELFNI DYALFDQWDV HVHVPAGATP
KDGPSAGITM LTALTSAFTQ RKVKSNLAMT GEITLRGKVL PVGGIKEKIL AAKRANIKDI
ILCKSNRKDI LEIKESYIKD LNFHYVTEMK EVIDLALTKE KVRNPQNLTV KPK
|
|---|
| |