Gene Phep_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1180 
Symbol 
ID8252278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1399221 
End bp1400063 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content44% 
IMG OID644934835 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_003091460 
Protein GI255531088 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.386198 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATT CCATTTATCC ATGCCTTACA CTAAAAGGTA AAATTGCGGA AGCATCAGAT 
TTTTATATCA AAACCTTTGG AGCAGGCAGA ATTGCACAAA CCTCTCCTTT TGTGATACAG
ATTGAGCTGA GCGGACAAAA GTTTATGCTA CTTAATGACG GGCCCAGCTC AGTTCCCAAC
CCCTCTGTCT CGTTCATGGT GATGTGCTCC ACAGCTGAAG AGACCGAACA ATACTGGAAC
AAATTAATTG AAGGCGGAAA TGCATTAATG GACATTGACA GTTACGACTG GAGCCCTAAA
TATGGCTGGG TGGTCGACAA ATATGGTATT TCCTGGCAAC TGTATACAGG CCGTAAAGAA
GATAGTTTTC AGAAATTTTG TCCTACCCTA ATGTTTACCG GCAACAGTGC CGGCAAGGCT
GCAGCAGCAG TTCATTTCTA TACCAGCCTG TTTCCGCAAT CCCATATTGA GGGCATCATG
AAGTATGATG AAAAAGACGG GGAACGCACT GATTTTGTAA AACATGCACA ATTTAAGATC
AATAACTTTA CCGCAATGGC TATGGATAGC TCTGAAGACC ACGGGTTTGG CTTTAACGAT
GCCATATCCA TGGTAGTAGA ATGTGATACA CAGGCAGAAA TTGACAACTA CTGGGAGCAA
CTTACTGCAG ATGGCGGACA TGAAGTGGCC TGTGGCTGGC TGACAGATAA ATATGGCATC
AGCTGGCAGA TTATTCCTAA AATGTTAGGT AAACTGATGA CAGATCCTGA ACGTGGCCAG
CGCGCCATGG GGGCATTGAT GAAAATGAAG AAACTGATCA TTGCCGATCT GGAAAACGCA
TAG
 
Protein sequence
MNNSIYPCLT LKGKIAEASD FYIKTFGAGR IAQTSPFVIQ IELSGQKFML LNDGPSSVPN 
PSVSFMVMCS TAEETEQYWN KLIEGGNALM DIDSYDWSPK YGWVVDKYGI SWQLYTGRKE
DSFQKFCPTL MFTGNSAGKA AAAVHFYTSL FPQSHIEGIM KYDEKDGERT DFVKHAQFKI
NNFTAMAMDS SEDHGFGFND AISMVVECDT QAEIDNYWEQ LTADGGHEVA CGWLTDKYGI
SWQIIPKMLG KLMTDPERGQ RAMGALMKMK KLIIADLENA