Gene Phep_1174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1174 
Symbol 
ID8252272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1390848 
End bp1391396 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content42% 
IMG OID644934829 
ProductUracil phosphoribosyltransferase 
Protein accessionYP_003091454 
Protein GI255531082 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2065] Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAAAC GAACACTGCT AGACGGTCAA AAATTCCAGA TCACAATTAA GCGACTTTGT 
CATCAATTAA TTGAGAACCA CAACGATTTT TCCAATACTG CTTTAATAGG TATACAGCCC
CGTGGCAGTT ATTTTGCCGA CAGGGTAAAA AATGAACTTT CAGAAGTCCT GAAAAAAAGT
ACGATCCTGA AAGGTAACCT TGACATTACT TTTTTCAGGG ACGATTTCAG GCGGAAAGAC
GGGCTGGTCT CAGCAAGCAG CAATACCATA GATTTTATCA TTGAAGGCAA GAACATCATC
TTAATTGATG ATGTTTTGTG GACCGGCCGT ACCATCAGGG CTGCAATGGA TGCCTTACTG
GCTTATGGCC GGCCGGCAAA AGTAGAGCTC ATGGTGTTGA TAGACAGAAG GTTTTCCAGA
CAACTGCCTA TAGAACCGAA TTACATAGGA CACCAGGTGG ACAGCCTGAA CTCGCAAATG
GTAAGGGTGA GCTGGAAGGA AACCGAAGGA GAAGACAAAG TTATCTTAAT ATCAGAAAGC
AATAAATAA
 
Protein sequence
MQKRTLLDGQ KFQITIKRLC HQLIENHNDF SNTALIGIQP RGSYFADRVK NELSEVLKKS 
TILKGNLDIT FFRDDFRRKD GLVSASSNTI DFIIEGKNII LIDDVLWTGR TIRAAMDALL
AYGRPAKVEL MVLIDRRFSR QLPIEPNYIG HQVDSLNSQM VRVSWKETEG EDKVILISES
NK