Gene Phep_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1170 
Symbol 
ID8252268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1383634 
End bp1384956 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content42% 
IMG OID644934825 
ProductSporulation domain protein 
Protein accessionYP_003091450 
Protein GI255531078 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATCT TATCATACCT GACAACACTT ATAAAAACCC ATAAAGAAGT GGGAATCCCC 
GGATTGGGAA CCATTTATAA AAGGAAATCT CCTGGGAGGT ATGATACAGA AACGCATTCG
TTTTTACCAC CAAGCTATAC GCTCGCATTT ACCTCAGATT TAAAGGAACA GGAGCTGCTA
AGGGGTATGA TCAGTAAAAA AAAGAACATT TCGGCCGATG CAGCTACCTA TTTCGTAGAA
CAGTTCTCTC AAAACGTACT GGATGAGCTG TCTAACCAGC AGGAATCAGA TTTTGGCGAC
CTGGGCACTT TTTCTACCGT ATCCGGCAGC CTCAGCTTCA TCCCGAAACA AGGCCAGAAC
TTTGGTTTTG ATTTTTATGG TTTACCTGTT TTAAAGGAGG CACAGGTTTT AGGGGAAGAA
GAGCCAGCAG TAAGCCTGCC TGCCGAAGAA CTACCGTTAA AAGAAGAGGC AATCCAGCTG
GAAGAAGAAG AATTTCCCGT TAAGGCGGAA CAGCTGGAAC TGGAGAACAA CAATGCCGAT
TTAAGTGATG GTACAGAAAT TATTGAAGAC GACGCGCTGA TTGATCCTCT TGAAGGCCCT
GCTGAACCGC TTATTGAGGA AACAAACAAT GATGAACAGC CGGTATACGA AGAAATAGCT
GAAGTACCTA ATATTCCTGA GCCATACAAG CAAGCATATG AACCCCAGAT AGAAACTCCG
GAAGGTATAA ATGAAGCATA CCAAAACCAA GAAAAAGAGC AGACCATAGT TTTTGAGCCA
CTGGAACCTG TAAATACCAA TTATATTACA GAACAGTTGG AAGAGAAAAA AGCAATGCCA
CTTTACCTGA AGGTTATCAT TGCTTTGCTG GCAGTGGCCG TAATTGCTGC AATTGCCTAT
CTTGCTAAAC CCGAAATTTT TACCGGTACT GTGGTAAAAA ATAATCCAGT ACAGGATACT
ACAGCGCTTA AGGTACAAGA CGACCGATTA AAAGCCGATT CTATTGCCCG GGCCGACAGC
ATCAGGATCA GCAATGAAAA AGCCATCATG GCCATTGATT CCGTTAAAGA CACCATCATC
TCTTACGACA TCATAGCCGC ATCATTGTTA AACCAAAAAG AAGCAGACCG TTTTCTGGCC
GATATGAAAA AAAGAGGCAT TCCTGCAAAA GTTGCAAAAA TGCGTGGCAA AAGGGTTAAG
ATCAGCATCG CCTCCTTCCT GGATGAAGAC AGTGCAAAAA AAGAACTTGA GATCCTGAAA
AAAACAACAA AGATTCCAGG AATTTACATT ACCCCAATTA GACACACAAA CAATCCTAAA
TAA
 
Protein sequence
MDILSYLTTL IKTHKEVGIP GLGTIYKRKS PGRYDTETHS FLPPSYTLAF TSDLKEQELL 
RGMISKKKNI SADAATYFVE QFSQNVLDEL SNQQESDFGD LGTFSTVSGS LSFIPKQGQN
FGFDFYGLPV LKEAQVLGEE EPAVSLPAEE LPLKEEAIQL EEEEFPVKAE QLELENNNAD
LSDGTEIIED DALIDPLEGP AEPLIEETNN DEQPVYEEIA EVPNIPEPYK QAYEPQIETP
EGINEAYQNQ EKEQTIVFEP LEPVNTNYIT EQLEEKKAMP LYLKVIIALL AVAVIAAIAY
LAKPEIFTGT VVKNNPVQDT TALKVQDDRL KADSIARADS IRISNEKAIM AIDSVKDTII
SYDIIAASLL NQKEADRFLA DMKKRGIPAK VAKMRGKRVK ISIASFLDED SAKKELEILK
KTTKIPGIYI TPIRHTNNPK