Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1170 |
Symbol | |
ID | 8252268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1383634 |
End bp | 1384956 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934825 |
Product | Sporulation domain protein |
Protein accession | YP_003091450 |
Protein GI | 255531078 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGATATCT TATCATACCT GACAACACTT ATAAAAACCC ATAAAGAAGT GGGAATCCCC GGATTGGGAA CCATTTATAA AAGGAAATCT CCTGGGAGGT ATGATACAGA AACGCATTCG TTTTTACCAC CAAGCTATAC GCTCGCATTT ACCTCAGATT TAAAGGAACA GGAGCTGCTA AGGGGTATGA TCAGTAAAAA AAAGAACATT TCGGCCGATG CAGCTACCTA TTTCGTAGAA CAGTTCTCTC AAAACGTACT GGATGAGCTG TCTAACCAGC AGGAATCAGA TTTTGGCGAC CTGGGCACTT TTTCTACCGT ATCCGGCAGC CTCAGCTTCA TCCCGAAACA AGGCCAGAAC TTTGGTTTTG ATTTTTATGG TTTACCTGTT TTAAAGGAGG CACAGGTTTT AGGGGAAGAA GAGCCAGCAG TAAGCCTGCC TGCCGAAGAA CTACCGTTAA AAGAAGAGGC AATCCAGCTG GAAGAAGAAG AATTTCCCGT TAAGGCGGAA CAGCTGGAAC TGGAGAACAA CAATGCCGAT TTAAGTGATG GTACAGAAAT TATTGAAGAC GACGCGCTGA TTGATCCTCT TGAAGGCCCT GCTGAACCGC TTATTGAGGA AACAAACAAT GATGAACAGC CGGTATACGA AGAAATAGCT GAAGTACCTA ATATTCCTGA GCCATACAAG CAAGCATATG AACCCCAGAT AGAAACTCCG GAAGGTATAA ATGAAGCATA CCAAAACCAA GAAAAAGAGC AGACCATAGT TTTTGAGCCA CTGGAACCTG TAAATACCAA TTATATTACA GAACAGTTGG AAGAGAAAAA AGCAATGCCA CTTTACCTGA AGGTTATCAT TGCTTTGCTG GCAGTGGCCG TAATTGCTGC AATTGCCTAT CTTGCTAAAC CCGAAATTTT TACCGGTACT GTGGTAAAAA ATAATCCAGT ACAGGATACT ACAGCGCTTA AGGTACAAGA CGACCGATTA AAAGCCGATT CTATTGCCCG GGCCGACAGC ATCAGGATCA GCAATGAAAA AGCCATCATG GCCATTGATT CCGTTAAAGA CACCATCATC TCTTACGACA TCATAGCCGC ATCATTGTTA AACCAAAAAG AAGCAGACCG TTTTCTGGCC GATATGAAAA AAAGAGGCAT TCCTGCAAAA GTTGCAAAAA TGCGTGGCAA AAGGGTTAAG ATCAGCATCG CCTCCTTCCT GGATGAAGAC AGTGCAAAAA AAGAACTTGA GATCCTGAAA AAAACAACAA AGATTCCAGG AATTTACATT ACCCCAATTA GACACACAAA CAATCCTAAA TAA
|
Protein sequence | MDILSYLTTL IKTHKEVGIP GLGTIYKRKS PGRYDTETHS FLPPSYTLAF TSDLKEQELL RGMISKKKNI SADAATYFVE QFSQNVLDEL SNQQESDFGD LGTFSTVSGS LSFIPKQGQN FGFDFYGLPV LKEAQVLGEE EPAVSLPAEE LPLKEEAIQL EEEEFPVKAE QLELENNNAD LSDGTEIIED DALIDPLEGP AEPLIEETNN DEQPVYEEIA EVPNIPEPYK QAYEPQIETP EGINEAYQNQ EKEQTIVFEP LEPVNTNYIT EQLEEKKAMP LYLKVIIALL AVAVIAAIAY LAKPEIFTGT VVKNNPVQDT TALKVQDDRL KADSIARADS IRISNEKAIM AIDSVKDTII SYDIIAASLL NQKEADRFLA DMKKRGIPAK VAKMRGKRVK ISIASFLDED SAKKELEILK KTTKIPGIYI TPIRHTNNPK
|
| |