Gene Phep_1167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1167 
Symbol 
ID8252265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1381702 
End bp1382523 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content47% 
IMG OID644934822 
Producthypothetical protein 
Protein accessionYP_003091447 
Protein GI255531075 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGACCT ACCCTAACGA AGAAAATAAT TACCCTAAAG CATTGGCCAT ATCTACCGGG 
ATCATGGCTG TTTTACTTGC TTTAAGTTTT TTTATTGCCA TAGGGACTTT CCAGCCTGAA
GTTGAAGCGG GCATGGGCGG TATAGTGGTC AATTACGGAA CTTCTGTAGA AGGCATGGGC
ACAGATTATA CGAGTATAGA GGAACCCTCG GCCGATCCCA ATGCCAACAA TCAGCCCCCG
GACAAAGTAG TACCTGCCGA GCCCACTCCC CAAAAATCTA CAGCTCAGAC CAGCGATAAG
GATATTGTAA CCCAAAATAC CGAGGATGCC GTAAGTGTAA AAACAAAAAC CACCAAAAGC
ACTTCAACGC CTGTTGCCAC TACAACTGAG ACCAAGCCCG AAAAGCCGGC CATCAATCAG
AATGCTTTAT ACAAGGGCAA AACCAATAAA GGAACCGGTG GCGGGGATGG CACTGGCAGT
ACCCCTGGTA ATCAGGGCAG TGTAAATGGC GATCCCCTGT CTAACAATTA TGGCGAAGGT
GGCTCCGGCT TTGGTGAAAC CCCCATTGCA TTGCGGAAAT TTACCAATCT GGTAACCCCC
CAGGATGACG GACAAAAAAC CGGAAAAATT GCGGTAAGGA TAAAGATCAA TAAAAGCGGG
GTGGTTATAG ATGCCACACC AGGTGTTAAG GGCACTACAT TAAATGACAG GGAACTCTGG
CAAAAATGTA AGGATGCCGT AATGGGCGCC CGTTTAACTC AGTCCGACTC TGCTCCCGAC
GTTCAGATTG GTGTAGTTGT TTTCAACTTT AAAGTAAAAT AA
 
Protein sequence
MMTYPNEENN YPKALAISTG IMAVLLALSF FIAIGTFQPE VEAGMGGIVV NYGTSVEGMG 
TDYTSIEEPS ADPNANNQPP DKVVPAEPTP QKSTAQTSDK DIVTQNTEDA VSVKTKTTKS
TSTPVATTTE TKPEKPAINQ NALYKGKTNK GTGGGDGTGS TPGNQGSVNG DPLSNNYGEG
GSGFGETPIA LRKFTNLVTP QDDGQKTGKI AVRIKINKSG VVIDATPGVK GTTLNDRELW
QKCKDAVMGA RLTQSDSAPD VQIGVVVFNF KVK