Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1160 |
Symbol | |
ID | 8252254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1363008 |
End bp | 1364525 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644934811 |
Product | altronate oxidoreductase |
Protein accession | YP_003091440 |
Protein GI | 255531068 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0246] Mannitol-1-phosphate/altronate dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTAT CAAAAGATAC CTTAAATAGC ATTAAACCAA ATCAAGTGGT TGCTCCCGAT GAAAAAATAT TTAACCTGCC GGAAAAAGTG CTGCAATTTG GCACGGGTGT GCTGCTGCGC GGATTGCCTG ATTTTTTTAT CGACAAGGCC AATAAAAAAG GATTGTTCAA TGGTAGGGTA GCTGTAATCA AATCGACCAG CAAAGGCGGT ACCAAAGAAT TTGATGATCA AAACGGTTTA TATACCATCT GTGTAAGGGG AATTGAAAAC GGACAGCCTG TAGAAGAGAA TATCATTTCT GCGGCCATCA GCAGAGTGCT TACTGCCGAT CAGGATTGGA ACACTATTCT GGATATTGCG GCATCACCTT TATTAAAGGT GATCGTTTCT AATACTACCG AAGTGGGGAT ACAGCTGGTA GAGGAAAGTA TAGACCAAAG CCCCCCGCAA TCTTTCCCCG CAAAATTACT CGCAGTGTTG TACGCACGCT ATAAGGCATT GGGAGCAGCT GCCGCCGCCG ATATAGCTGT AATTGCTACT GAACTTATTT CGGATAACGG AAAAAAACTG GAGGCCATTG TATTGCAGCT AGCTGCATTT AACAAGCTGG ACGAAGCATT TTTAACCTGG TTAAACGCCC ATGTCCATTT CTGCAATTCG CTGGTAGACC GTATTGTTCC CGGAAAACCT GATGCAACCA CACTGGCTAA CCTGGAAACA GAACTGGGGT ATAAAGATGA ACTGGTCATT ATGGCCGAAC CTTACCGCCT TTGGGCCATT GAAGGAGGAC AAAAGGTTGC TGAACTGCTT GGCCTGGAAG CCGCTGATAA CGGTGTAATT GTGAGGCCCG ATATTGAAAT ATTTAAAGAA CTGAAAGTAC GCCTGCTGAA TGGTTCGCAT ACCCTAACCT CGGGCATTGC TTATTTGCTG GGTATCGATA CGGTAACCAA AGCCATGAAC AACAGCCTGA CCAGGAATTA TGTAAATGAG CTGATGATGC AGGAAATTGT TGGTGCCATA CCTTATGATG TAGCGCCTGA TGAAGCTATT GCTTTTGCAA ATACGGTGAT AGACCGCTTT GCAAACCCAA GTATCCAGCA CCTCTGGATC AACATTACCT TCCAGTATAC CATGAAAATG AAAATCAGGA TTTTGCCTGT CCTGCTCAAT TATTATAAAC TCAATCAAAA AGTACCTGCT CATATTGCCT TTGGTTTTGC CGCATTCCTG CTGTTCATGA AATCGGCCAG AAAAGATGGT GATCAGTACT TTGGCAATTA CAAAGGTCAT GAATACGCAA TAACCGATGA TGAAGCTGCT TATTTTTACA ATATCGCACA GCAAAATGAA TCGGAATACG TAAATTTAGT ACTGGCAGAC AGTAAATTAT GGGGTACTGA CCTTTCGTCA TTGCAGGGCT TTAATGAAAC GGTAAAAGAA AACTATAACA ATATATTGAA ACATGGTGTG GCCGACGCTT TGGCCAGGCT GGAAGAGACA TTACAAATTA AACAATGA
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Protein sequence | MTLSKDTLNS IKPNQVVAPD EKIFNLPEKV LQFGTGVLLR GLPDFFIDKA NKKGLFNGRV AVIKSTSKGG TKEFDDQNGL YTICVRGIEN GQPVEENIIS AAISRVLTAD QDWNTILDIA ASPLLKVIVS NTTEVGIQLV EESIDQSPPQ SFPAKLLAVL YARYKALGAA AAADIAVIAT ELISDNGKKL EAIVLQLAAF NKLDEAFLTW LNAHVHFCNS LVDRIVPGKP DATTLANLET ELGYKDELVI MAEPYRLWAI EGGQKVAELL GLEAADNGVI VRPDIEIFKE LKVRLLNGSH TLTSGIAYLL GIDTVTKAMN NSLTRNYVNE LMMQEIVGAI PYDVAPDEAI AFANTVIDRF ANPSIQHLWI NITFQYTMKM KIRILPVLLN YYKLNQKVPA HIAFGFAAFL LFMKSARKDG DQYFGNYKGH EYAITDDEAA YFYNIAQQNE SEYVNLVLAD SKLWGTDLSS LQGFNETVKE NYNNILKHGV ADALARLEET LQIKQ
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