Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1157 |
Symbol | |
ID | 8252251 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1358998 |
End bp | 1359966 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934808 |
Product | Pectinesterase |
Protein accession | YP_003091437 |
Protein GI | 255531065 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4677] Pectin methylesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAT TGGGTCTTAA ATGCCTTACT ATAGCCCTGG TAGCCCTGCT ATCGGGAACG AATATTTACG GCCAGGATAA AAAGATCATT GTTGCACAGG ATGGTAGTGG TGATTATAAA ACGGTACAGG AAGCTATAAA CGCGGTGCCC GATTTTAGAA ATGCCACTAC GGTTATCCTG ATCAAAAATG GCAATTACAA AGAAAAACTT AACCTTTCGG CCTCTAAAAA GATGGTTAAA CTGATTGGCG AAAACCCTGA AAAAACTGTG CTTACTTATG ATGACTATGC ACAAAAGAAA AACAGTTTCG GAGAAGCAAT GGGTACTTCA GGATCTTCCT CATTCTATAT TTATGGGGAT GGTTTTGCTG CAGAGAACAT CACCTTTGCC AATTCTTCAG GGCCGGTCGG ACAGGCTGTT GCGGTATGGA TCGCATCGGA TCAGGCGGTA TTCAAAAACT GCAGGTTCCT TGGTTTTCAG GATACACTTT ATACCTATGG CCGTGGCAGC AGGCAATATT ATAAAAACTG TTATATAGAA GGGACAACTG ATTTTATTTT TGGGTCATCT ACTGCAATGT TTGAAAATTG TATCCTCTTT TGCAAAAAAG GTGGGTCATA CCTTACCGCG GCCTCTACCC CCGATACAAC CAAATATGGT TATGTTTTCA AAAATTGTAA AATAACCGGC GATGCACCTG AAAACTCTTT TGCATTGGGC CGTCCATGGC GACCGTATGC TAAAACTGTT TTCATCAATT GCGAACTTGG AAATATGATC AAACCCGCCG GCTGGGACCA TTGGGGTAAA GAGAGCAATA AACAGACAGC CTATTATGCA GAATATAAAA ACACCGGACC TGGTTATAAA CCCGATAAAA GAACAGATTG GTCGCAGCAG CTTAGTGATG ACGAAGCCAA AACTTATAAT ATAACACAGG TTTTCCGTGG CTGGAACCCT GTACAATAA
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Protein sequence | MAKLGLKCLT IALVALLSGT NIYGQDKKII VAQDGSGDYK TVQEAINAVP DFRNATTVIL IKNGNYKEKL NLSASKKMVK LIGENPEKTV LTYDDYAQKK NSFGEAMGTS GSSSFYIYGD GFAAENITFA NSSGPVGQAV AVWIASDQAV FKNCRFLGFQ DTLYTYGRGS RQYYKNCYIE GTTDFIFGSS TAMFENCILF CKKGGSYLTA ASTPDTTKYG YVFKNCKITG DAPENSFALG RPWRPYAKTV FINCELGNMI KPAGWDHWGK ESNKQTAYYA EYKNTGPGYK PDKRTDWSQQ LSDDEAKTYN ITQVFRGWNP VQ
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