| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1156 |
|---|
| Symbol | |
|---|
| ID | 8252250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1358196 |
|---|
| End bp | 1358996 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644934807 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_003091436 |
|---|
| Protein GI | 255531064 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.866129 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCGG AGATCCGCGA TGGAGATAAA AAAAATGATA AAATGAGTGT ATTAAATAAG
TTTATGTTGC TTGCAATGAT CAGTACTTTA CTGTTATCTT TCAGGAGCCC ACCTAAAAAG
ATTAAAGTTT ACCTGATCGG TGATTCTACC ATGTCCGTAA AACAAAAAAG GTATTATCCG
GAAACCGGTT GGGGTATGCC ATTTGCAGGT TTTTTTGACG CTGAAGTGGA AGTGGATAAT
CGTGCCCAGA ATGGAAGAAG CACAAAGAGT TTCATAAATG AGAAACGCTG GCAATCTGTG
ATGGATAGTT TAAACGAGGA CGACTATGTA TTTATCCAGT TTGGCCATAA TGATGAAGTG
GAAACAAAGA AGAATTATAC CAAACCAGAA GAATTTAAGG CTAACCTGAT CAGGTTCATT
ACCGATACAA AAGCTAAAAA GGCAACACCA ATATTGTTAA GCCCGGTTTC CAGGCGAAGG
TTTGATGTTG GGGGCAAAGC TCAGGAAACA CATCCCTATA CCTATTTGGT AAAAGAAGTG
GCCTCCGAAC AAAAAGTAGC TTTCATTGAC CTGGATGCCA GGAGTATTGC ACTTTATCAG
AAATTTGGCC CTGATGCTTC TACTTTGTTG TTCAACCACC TGGAACCCGG TATACATCCC
AATTATCCCG AAGGCAAAAT TGATGATACC CATTTTAATG AACTGGGTGC CCGCGAAATT
GCTCAGCTGG TATTGCAGGA ACTCAGGAAG CTTAATTTAG ATCTCAGTAA TCACATTGTT
AAACCACAAC CAAAAAAATA A
|
|---|
| Protein sequence | MESEIRDGDK KNDKMSVLNK FMLLAMISTL LLSFRSPPKK IKVYLIGDST MSVKQKRYYP
ETGWGMPFAG FFDAEVEVDN RAQNGRSTKS FINEKRWQSV MDSLNEDDYV FIQFGHNDEV
ETKKNYTKPE EFKANLIRFI TDTKAKKATP ILLSPVSRRR FDVGGKAQET HPYTYLVKEV
ASEQKVAFID LDARSIALYQ KFGPDASTLL FNHLEPGIHP NYPEGKIDDT HFNELGAREI
AQLVLQELRK LNLDLSNHIV KPQPKK
|
|---|
| |