| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1148 |
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| Symbol | |
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| ID | 8252242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1344603 |
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| End bp | 1345613 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934799 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003091428 |
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| Protein GI | 255531056 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.907007 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGC CAGCTACTTT AAAAGATATT GCAATTGCTT TAGGATTGTC TACCTCTACC
GTGTCAAGGG CGTTAAGAGA TACTTACGAG ATCAGCCCCA AAACCAAAAA ACTGGTACTG
GAATACGCAG AAAAAATTAA CTATCGCCCC AATCCTATTG CACAAAGTTT AAAAGAACGC
CGTACAAAAT CAATTGGCGT TATTGTAAGT GAAGTAGCTA ACCAGTATTT TTCTCAGGCC
ATCAATGGCA TTGAATCCAT TGCTTACGAT AAGGGTTACC ATGTTATCAT TACCCAGACA
CATGAATCGT ATGAAAGAGA AATGATCAAT ACCCAACATT TGGCCTCAAG GGGTGTAGAT
GGTTTACTAA TTTCACTATC CGCAGAAACA AAAGATACCG GTCACCTTAG TGCTTTACAC
GATAAAGGAT TACCTATCGT ATTTTTCGAC CGCATTGCGG AGGAGATACA TACCCATAAA
ATTAGTGCAA ATAATGAAAA AGGTGCCTTT GAGGCTACTG AACACCTGAT CAGAGCTGGC
TATAAAAAAA TTGCACATTT AAGCAGTTCA GCCCATCTGT CTATCAGTAT AGAGCGTCTT
CGGGGATATA CTAAGGCCTT AAACCAATAT GGAATAGCAC TCAACCCTGA TTACATAAAA
AATTGTCCGC ATGGCGGTAT GTTTCAGGAA GAAACGGAAA GTGCAGTTTT AGAGCTGCTA
AACCTTAAAG AAAAACCGGA TGCCATATTT GTGGCAGGCG ACCGGCTATC GATGGGCTGT
CTTACTGTAT TTAAGAGTTT AAATGTAGAT GCGCTGAATG ACATGGCCAT TGCCGGCTTT
AGCAATTCTG ATATGCTGGA TCTACTGAAG TATCCGCTTA CCTCTGTGCG GCAGCCGGCC
TTTGAAATGG GACAGATTGC CACAACCATG CTGCTCCAAC TGATAGAAAG CAAAAGGCCG
GTAACAGAAT TTGAGAATAA GGTACTCGAT ACAAAATTGT TCCTCCGCTG A
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| Protein sequence | MFEPATLKDI AIALGLSTST VSRALRDTYE ISPKTKKLVL EYAEKINYRP NPIAQSLKER
RTKSIGVIVS EVANQYFSQA INGIESIAYD KGYHVIITQT HESYEREMIN TQHLASRGVD
GLLISLSAET KDTGHLSALH DKGLPIVFFD RIAEEIHTHK ISANNEKGAF EATEHLIRAG
YKKIAHLSSS AHLSISIERL RGYTKALNQY GIALNPDYIK NCPHGGMFQE ETESAVLELL
NLKEKPDAIF VAGDRLSMGC LTVFKSLNVD ALNDMAIAGF SNSDMLDLLK YPLTSVRQPA
FEMGQIATTM LLQLIESKRP VTEFENKVLD TKLFLR
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